Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC97Q96F63 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC97Q96F63 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC97Q96F63 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC97Q96F63 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC97Q96F63 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC97Q96F63 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC97Q96F63 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC97Q96F63 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC97Q96F63 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC97Q96F63 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC97Q96F63 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC97Q96F63 AL049757.1-201ENST00000616842 1596 ntBASIC17.45■□□□□ 0.38
CCDC97Q96F63 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC97Q96F63 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC97Q96F63 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC97Q96F63 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC97Q96F63 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 HLA-J-201ENST00000462773 1622 ntBASIC17.44■□□□□ 0.38
CCDC97Q96F63 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC97Q96F63 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC97Q96F63 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC97Q96F63 FAM197Y8-203ENST00000450145 560 ntBASIC17.44■□□□□ 0.38
CCDC97Q96F63 AC009533.2-201ENST00000543664 586 ntBASIC17.44■□□□□ 0.38
CCDC97Q96F63 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 AL671883.3-201ENST00000603274 991 ntBASIC17.44■□□□□ 0.38
CCDC97Q96F63 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC97Q96F63 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC97Q96F63 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC97Q96F63 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC97Q96F63 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC97Q96F63 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC97Q96F63 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC97Q96F63 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC97Q96F63 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 FAM220CP-201ENST00000395253 831 ntBASIC17.43■□□□□ 0.38
CCDC97Q96F63 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 AC005104.2-201ENST00000427818 678 ntBASIC17.43■□□□□ 0.38
CCDC97Q96F63 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 RNPS1P1-201ENST00000507437 918 ntBASIC17.43■□□□□ 0.38
CCDC97Q96F63 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 AC109462.3-201ENST00000573934 613 ntBASIC17.43■□□□□ 0.38
CCDC97Q96F63 MIR5100-201ENST00000579544 119 ntBASIC17.43■□□□□ 0.38
CCDC97Q96F63 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CCDC97Q96F63 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC97Q96F63 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CCDC97Q96F63 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC97Q96F63 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms