Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 LINC00895-201ENST00000629028 1637 ntBASIC18.01■□□□□ 0.47
TRIM11Q96F44 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM11Q96F44 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM11Q96F44 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM11Q96F44 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM11Q96F44 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18■□□□□ 0.47
TRIM11Q96F44 AL603756.1-201ENST00000606511 2163 ntBASIC18■□□□□ 0.47
TRIM11Q96F44 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18■□□□□ 0.47
TRIM11Q96F44 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18■□□□□ 0.47
TRIM11Q96F44 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18■□□□□ 0.47
TRIM11Q96F44 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRIM11Q96F44 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM11Q96F44 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18■□□□□ 0.47
TRIM11Q96F44 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
TRIM11Q96F44 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18■□□□□ 0.47
TRIM11Q96F44 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM11Q96F44 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM11Q96F44 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18■□□□□ 0.47
TRIM11Q96F44 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TRIM11Q96F44 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18■□□□□ 0.47
TRIM11Q96F44 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
TRIM11Q96F44 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18■□□□□ 0.47
TRIM11Q96F44 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18■□□□□ 0.47
TRIM11Q96F44 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18■□□□□ 0.47
TRIM11Q96F44 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18■□□□□ 0.47
TRIM11Q96F44 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM11Q96F44 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRIM11Q96F44 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18■□□□□ 0.47
TRIM11Q96F44 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM11Q96F44 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18■□□□□ 0.47
TRIM11Q96F44 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM11Q96F44 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM11Q96F44 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM11Q96F44 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18■□□□□ 0.47
TRIM11Q96F44 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM11Q96F44 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 AL391256.1-201ENST00000443260 1855 ntBASIC17.99■□□□□ 0.47
TRIM11Q96F44 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 TSPY19P-201ENST00000418461 509 ntBASIC17.99■□□□□ 0.47
TRIM11Q96F44 TSPY18P-201ENST00000441642 509 ntBASIC17.99■□□□□ 0.47
TRIM11Q96F44 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 SCARNA2-201ENST00000458748 420 ntBASIC17.99■□□□□ 0.47
TRIM11Q96F44 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 AC091304.2-201ENST00000564639 760 ntBASIC17.99■□□□□ 0.47
TRIM11Q96F44 PRELID1P1-202ENST00000567272 903 ntBASIC17.99■□□□□ 0.47
TRIM11Q96F44 AC139887.3-201ENST00000568585 713 ntBASIC17.99■□□□□ 0.47
TRIM11Q96F44 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 LINC01711-201ENST00000598340 967 ntBASIC17.99■□□□□ 0.47
TRIM11Q96F44 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.99■□□□□ 0.47
TRIM11Q96F44 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM11Q96F44 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM11Q96F44 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms