Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SH3KBP1Q96B97 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 AC046185.3-201ENST00000623228 1824 ntBASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SH3KBP1Q96B97 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.89■□□□□ 0.3
SH3KBP1Q96B97 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SH3KBP1Q96B97 AL138688.1-201ENST00000624851 1594 ntBASIC16.89■□□□□ 0.3
SH3KBP1Q96B97 AC097637.2-201ENST00000624096 1997 ntBASIC16.89■□□□□ 0.3
SH3KBP1Q96B97 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 RNA5SP416-201ENST00000516838 111 ntBASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 CROCCP2-202ENST00000412962 2773 ntBASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SH3KBP1Q96B97 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SH3KBP1Q96B97 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
SH3KBP1Q96B97 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SH3KBP1Q96B97 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SH3KBP1Q96B97 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SH3KBP1Q96B97 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SH3KBP1Q96B97 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms