Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 AC073592.5-201ENST00000624854 528 ntBASIC15.33■□□□□ 0.04
PTP4A1Q93096 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTP4A1Q93096 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PTP4A1Q93096 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 AC092364.2-201ENST00000596710 2692 ntBASIC15.32■□□□□ 0.04
PTP4A1Q93096 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 AL391256.1-201ENST00000443260 1855 ntBASIC15.32■□□□□ 0.04
PTP4A1Q93096 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 KLF4P1-201ENST00000412782 1185 ntBASIC15.32■□□□□ 0.04
PTP4A1Q93096 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 TP73-AS1-210ENST00000637775 1455 ntBASIC15.32■□□□□ 0.04
PTP4A1Q93096 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTP4A1Q93096 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.32■□□□□ 0.04
PTP4A1Q93096 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A1Q93096 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A1Q93096 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A1Q93096 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A1Q93096 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A1Q93096 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A1Q93096 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A1Q93096 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A1Q93096 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 ATP5G2P1-201ENST00000433580 426 ntBASIC15.31■□□□□ 0.04
PTP4A1Q93096 AP002383.4-201ENST00000442518 975 ntBASIC15.31■□□□□ 0.04
PTP4A1Q93096 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 AP002414.4-201ENST00000589764 1148 ntBASIC15.31■□□□□ 0.04
PTP4A1Q93096 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A1Q93096 Z69720.1-201ENST00000601483 472 ntBASIC15.31■□□□□ 0.04
PTP4A1Q93096 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 PCDHA1-201ENST00000378133 2726 ntBASIC15.31■□□□□ 0.04
PTP4A1Q93096 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A1Q93096 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A1Q93096 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A1Q93096 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms