Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 AL021920.2-201ENST00000624828 1351 ntBASIC18.29■□□□□ 0.52
SEMA4DQ92854 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEMA4DQ92854 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 IGHV3-22-201ENST00000520721 359 ntBASIC18.28■□□□□ 0.52
SEMA4DQ92854 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.28■□□□□ 0.52
SEMA4DQ92854 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
SEMA4DQ92854 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEMA4DQ92854 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.27■□□□□ 0.52
SEMA4DQ92854 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 AL603756.1-201ENST00000606511 2163 ntBASIC18.27■□□□□ 0.52
SEMA4DQ92854 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.27■□□□□ 0.52
SEMA4DQ92854 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.27■□□□□ 0.52
SEMA4DQ92854 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.27■□□□□ 0.52
SEMA4DQ92854 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.27■□□□□ 0.52
SEMA4DQ92854 GGTLC5P-201ENST00000617623 998 ntBASIC18.27■□□□□ 0.52
SEMA4DQ92854 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.27■□□□□ 0.52
SEMA4DQ92854 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.27■□□□□ 0.52
SEMA4DQ92854 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SEMA4DQ92854 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.27■□□□□ 0.52
SEMA4DQ92854 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA4DQ92854 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SEMA4DQ92854 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SEMA4DQ92854 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.27■□□□□ 0.51
SEMA4DQ92854 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SEMA4DQ92854 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SEMA4DQ92854 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SEMA4DQ92854 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
SEMA4DQ92854 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA4DQ92854 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA4DQ92854 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA4DQ92854 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA4DQ92854 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA4DQ92854 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA4DQ92854 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA4DQ92854 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA4DQ92854 RNA5SP415-201ENST00000517246 115 ntBASIC18.26■□□□□ 0.51
SEMA4DQ92854 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 UNC93B6-202ENST00000528242 690 ntBASIC18.26■□□□□ 0.51
SEMA4DQ92854 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA4DQ92854 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 PGM5P2-202ENST00000637225 1043 ntBASIC18.26■□□□□ 0.51
SEMA4DQ92854 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA4DQ92854 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.26■□□□□ 0.51
SEMA4DQ92854 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms