Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 AC099522.2-201ENST00000607001 744 ntBASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 ACTL9-202ENST00000612068 1252 ntBASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 AL390754.1-201ENST00000619088 582 ntBASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2AF1L4Q8WU68 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 AC079140.1-201ENST00000508039 487 ntBASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 AC093010.1-201ENST00000473625 1624 ntBASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2AF1L4Q8WU68 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
U2AF1L4Q8WU68 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 TREML5P-201ENST00000421694 576 ntBASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 IGHV3-42-201ENST00000520410 361 ntBASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 AC140878.1-201ENST00000565277 250 ntBASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 AC027307.3-201ENST00000594262 1100 ntBASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 AC012317.2-201ENST00000623305 2251 ntBASIC19.45■□□□□ 0.7
U2AF1L4Q8WU68 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 GPS2P2-201ENST00000430745 888 ntBASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 AC009336.1-201ENST00000608941 1553 ntBASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2AF1L4Q8WU68 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms