Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 LYSMD4-203ENST00000378904 2122 ntBASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.6
ALMS1Q8TCU4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 AC020907.1-201ENST00000616460 1350 ntBASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 AC104989.1-201ENST00000519711 778 ntBASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 AC098818.2-201ENST00000564925 2320 ntBASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 TMEM261P1-201ENST00000604899 340 ntBASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.27□□□□□ -0.61
ALMS1Q8TCU4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 MPDU1-223ENST00000582151 728 ntBASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 AC087289.5-201ENST00000586076 3175 ntBASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ALMS1Q8TCU4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms