Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ITIH3-201ENST00000416872 2220 ntTSL 2 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 BEND3P1-202ENST00000449695 2762 ntTSL 4 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 CTBP1-AS2-202ENST00000505364 2423 ntTSL 2 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 ZBTB14-201ENST00000357006 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 SLC18A1-204ENST00000437980 2822 ntTSL 5 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC10.52□□□□□ -0.72
SVIPQ8NHG7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SVIPQ8NHG7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SVIPQ8NHG7 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC10.52□□□□□ -0.72
SVIPQ8NHG7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SVIPQ8NHG7 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
SVIPQ8NHG7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SVIPQ8NHG7 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SVIPQ8NHG7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SVIPQ8NHG7 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC10.52□□□□□ -0.72
SVIPQ8NHG7 GPR12-201ENST00000381436 1981 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
SVIPQ8NHG7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
SVIPQ8NHG7 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SVIPQ8NHG7 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 ABR-228ENST00000574437 3196 ntTSL 5 BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 SLC5A6-201ENST00000310574 3231 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 TRIAP1-202ENST00000546954 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 KCNJ15-206ENST00000398932 2747 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 CCDC81-202ENST00000445632 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 GRPEL1-201ENST00000264954 2775 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 AC004453.2-201ENST00000624861 2153 ntBASIC10.52□□□□□ -0.73
SVIPQ8NHG7 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SVIPQ8NHG7 LPP-AS2-201ENST00000605573 2852 ntBASIC10.51□□□□□ -0.73
SVIPQ8NHG7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 AP1B1-203ENST00000402502 2935 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 SMAP2-205ENST00000539317 2501 ntTSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 LINC01572-206ENST00000624829 1666 ntTSL 5 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 SIDT2-220ENST00000628876 2609 ntTSL 5 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 AC006064.1-201ENST00000499202 560 ntTSL 4 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 EXOSC2-203ENST00000372352 1957 ntTSL 5 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 TMEM213-203ENST00000442682 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 GOLGA8DP-201ENST00000314246 2786 ntTSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 WDR20-206ENST00000454394 2067 ntTSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 GNPDA1-202ENST00000500692 2319 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC10.51□□□□□ -0.73
SVIPQ8NHG7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms