Protein–RNA interactions for Protein: Q8NEU8

APPL2, DCC-interacting protein 13-beta, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPL2Q8NEU8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 AC254562.1-201ENST00000417586 456 ntBASIC18.18■□□□□ 0.5
APPL2Q8NEU8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 AC107918.2-201ENST00000530817 355 ntBASIC18.18■□□□□ 0.5
APPL2Q8NEU8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 SNHG9-202ENST00000564014 471 ntBASIC18.18■□□□□ 0.5
APPL2Q8NEU8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 AL645728.2-201ENST00000641974 660 ntBASIC18.18■□□□□ 0.5
APPL2Q8NEU8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
APPL2Q8NEU8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 AL596442.2-201ENST00000610240 980 ntBASIC18.17■□□□□ 0.5
APPL2Q8NEU8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 AC091812.2-201ENST00000619081 385 ntBASIC18.17■□□□□ 0.5
APPL2Q8NEU8 REXO1L3P-201ENST00000622202 1288 ntBASIC18.17■□□□□ 0.5
APPL2Q8NEU8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APPL2Q8NEU8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APPL2Q8NEU8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms