Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC018845.2-201ENST00000568326 409 ntBASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 MPDU1-223ENST00000582151 728 ntBASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 AC023141.13-201ENST00000604991 943 ntBASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 PKD1P1-201ENST00000458669 6805 ntBASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 HCG4-201ENST00000418983 998 ntBASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 AL513480.1-201ENST00000451731 511 ntBASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 AP002490.2-201ENST00000524791 560 ntBASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 AC004877.2-201ENST00000623941 599 ntBASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 AC106820.2-201ENST00000563775 3264 ntBASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAM1L1Q8N609 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 BCAR1-209ENST00000546196 1340 ntBASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 AL645728.2-201ENST00000641974 660 ntBASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAM1L1Q8N609 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAM1L1Q8N609 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
TRAM1L1Q8N609 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TRAM1L1Q8N609 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAM1L1Q8N609 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAM1L1Q8N609 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAM1L1Q8N609 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAM1L1Q8N609 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.77■□□□□ 0.27
TRAM1L1Q8N609 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TRAM1L1Q8N609 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAM1L1Q8N609 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms