Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEFF1Q8IYR6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 SPDYE7P-202ENST00000420373 878 ntBASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 KRT8P23-201ENST00000560090 1207 ntBASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 AC008761.3-201ENST00000624803 892 ntBASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TMEFF1Q8IYR6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 AC005225.4-201ENST00000557330 545 ntBASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 MIR6080-201ENST00000617359 66 ntBASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEFF1Q8IYR6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 LYSMD4-203ENST00000378904 2122 ntBASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 AC067852.2-201ENST00000590513 2313 ntBASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEFF1Q8IYR6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms