Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 AC006449.5-201ENST00000610658 2098 ntBASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 AC004870.1-201ENST00000315132 882 ntBASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 AF186996.4-201ENST00000467186 377 ntBASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 MIR7706-201ENST00000613747 67 ntBASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 PGM5P2-202ENST00000637225 1043 ntBASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 ME2P1-201ENST00000426028 1970 ntBASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 AC129492.6-201ENST00000611383 1305 ntBASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.4■□□□□ 0.54
ZC3H3Q8IXZ2 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.39■□□□□ 0.54
ZC3H3Q8IXZ2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 FDX1P1-201ENST00000449115 551 ntBASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 AL671710.1-201ENST00000610245 2349 ntBASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H3Q8IXZ2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 GGT4P-201ENST00000623672 1708 ntBASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 AC009078.2-202ENST00000463353 338 ntBASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 AC005412.3-201ENST00000580309 715 ntBASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 CYP2A7P1-201ENST00000595391 815 ntBASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 AC117500.6-201ENST00000624871 588 ntBASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 ALOX12P2-203ENST00000570921 1945 ntBASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZC3H3Q8IXZ2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms