Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 AL391256.1-201ENST00000443260 1855 ntBASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC83Q8IWF9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC83Q8IWF9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC83Q8IWF9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC83Q8IWF9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC83Q8IWF9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.02■□□□□ 0.79
CCDC83Q8IWF9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC83Q8IWF9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC83Q8IWF9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC83Q8IWF9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 KRT16P4-201ENST00000453883 522 ntBASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 DOC2GP-204ENST00000639052 2548 ntBASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 TUBB8P12-201ENST00000308911 1335 ntBASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 TUBB7P-202ENST00000428444 1305 ntBASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 TUBB8P7-204ENST00000567960 1332 ntBASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC83Q8IWF9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CCDC83Q8IWF9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CCDC83Q8IWF9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20■□□□□ 0.79
CCDC83Q8IWF9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20■□□□□ 0.79
CCDC83Q8IWF9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20■□□□□ 0.79
CCDC83Q8IWF9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20■□□□□ 0.79
CCDC83Q8IWF9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC83Q8IWF9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20■□□□□ 0.79
CCDC83Q8IWF9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms