Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM1Q86UE6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 AC105917.1-201ENST00000506637 2539 ntBASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LRRTM1Q86UE6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 MTHFR-217ENST00000641820 1569 ntBASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 RN7SL606P-201ENST00000472779 293 ntBASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 AC073912.3-201ENST00000624414 853 ntBASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRTM1Q86UE6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LRRTM1Q86UE6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms