Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.77■□□□□ 0.28
SYVN1Q86TM6 AD001527.2-201ENST00000622994 785 ntBASIC16.77■□□□□ 0.28
SYVN1Q86TM6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SYVN1Q86TM6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SYVN1Q86TM6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SYVN1Q86TM6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SYVN1Q86TM6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SYVN1Q86TM6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.77■□□□□ 0.27
SYVN1Q86TM6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.77■□□□□ 0.27
SYVN1Q86TM6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.77■□□□□ 0.27
SYVN1Q86TM6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
SYVN1Q86TM6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SYVN1Q86TM6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SYVN1Q86TM6 ZNF259P1-201ENST00000407656 1365 ntBASIC16.77■□□□□ 0.27
SYVN1Q86TM6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SYVN1Q86TM6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 KRT18P13-201ENST00000400056 1290 ntBASIC16.76■□□□□ 0.27
SYVN1Q86TM6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 RPL13AP23-201ENST00000480739 586 ntBASIC16.76■□□□□ 0.27
SYVN1Q86TM6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 AL049840.3-201ENST00000602669 611 ntBASIC16.76■□□□□ 0.27
SYVN1Q86TM6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 AL356309.3-201ENST00000624132 1934 ntBASIC16.76■□□□□ 0.27
SYVN1Q86TM6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SYVN1Q86TM6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 AC003669.1-201ENST00000334569 611 ntBASIC16.75■□□□□ 0.27
SYVN1Q86TM6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 HNRNPDP1-201ENST00000439535 754 ntBASIC16.75■□□□□ 0.27
SYVN1Q86TM6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 AC021087.4-201ENST00000563761 564 ntBASIC16.75■□□□□ 0.27
SYVN1Q86TM6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYVN1Q86TM6 AL139288.1-201ENST00000623748 933 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms