Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 CHCHD2P8-201ENST00000429873 447 ntBASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 AC084018.2-201ENST00000613093 2607 ntBASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 AL049757.1-201ENST00000616842 1596 ntBASIC11□□□□□ -0.65
MRPL55Q7Z7F7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 STK19B-204ENST00000512515 211 ntBASIC11□□□□□ -0.65
MRPL55Q7Z7F7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 AL049597.2-201ENST00000565575 961 ntBASIC11□□□□□ -0.65
MRPL55Q7Z7F7 STK25P1-201ENST00000585406 838 ntBASIC11□□□□□ -0.65
MRPL55Q7Z7F7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 AC005336.2-201ENST00000593183 939 ntBASIC11□□□□□ -0.65
MRPL55Q7Z7F7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 KRT8P10-201ENST00000450021 1447 ntBASIC11□□□□□ -0.65
MRPL55Q7Z7F7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 AC067750.1-201ENST00000608826 6545 ntBASIC11□□□□□ -0.65
MRPL55Q7Z7F7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11□□□□□ -0.65
MRPL55Q7Z7F7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 FUT8-AS1-201ENST00000621019 1521 ntBASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MRPL55Q7Z7F7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms