Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 AC061975.2-201ENST00000581722 295 ntBASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 SPDYE17-201ENST00000412399 783 ntBASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RGPD4Q7Z3J3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 KLF2P4-201ENST00000451959 1225 ntBASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 C2orf69P2-201ENST00000562032 1123 ntBASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 AL033527.5-201ENST00000641382 801 ntBASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 AC093525.8-201ENST00000624099 1342 ntBASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 SLC25A24-204ENST00000569674 2357 ntBASIC21.16■□□□□ 0.98
RGPD4Q7Z3J3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 SDHAP3-202ENST00000515467 728 ntBASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 AC074044.1-201ENST00000609673 707 ntBASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RGPD4Q7Z3J3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RGPD4Q7Z3J3 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC21.14■□□□□ 0.98
RGPD4Q7Z3J3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RGPD4Q7Z3J3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
RGPD4Q7Z3J3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RGPD4Q7Z3J3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RGPD4Q7Z3J3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RGPD4Q7Z3J3 GPAA1P2-201ENST00000417923 928 ntBASIC21.14■□□□□ 0.97
RGPD4Q7Z3J3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RGPD4Q7Z3J3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC21.14■□□□□ 0.97
RGPD4Q7Z3J3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC21.14■□□□□ 0.97
RGPD4Q7Z3J3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC21.14■□□□□ 0.97
RGPD4Q7Z3J3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC21.14■□□□□ 0.97
RGPD4Q7Z3J3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.14■□□□□ 0.97
RGPD4Q7Z3J3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RGPD4Q7Z3J3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms