Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 AC105020.1-201ENST00000435356 2205 ntBASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.33■□□□□ 0.04
NHLRC1Q6VVB1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 AC025062.2-201ENST00000605477 670 ntBASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 AL589182.2-201ENST00000619332 1049 ntBASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NHLRC1Q6VVB1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 DOC2GP-204ENST00000639052 2548 ntBASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 AP002414.1-201ENST00000391405 1147 ntBASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 AC021087.4-201ENST00000563761 564 ntBASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 MTDHP4-201ENST00000600287 670 ntBASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms