Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AC005104.2-201ENST00000427818 678 ntBASIC12.91□□□□□ -0.34
MRPL54Q6P161 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 AC011506.1-201ENST00000474329 610 ntBASIC12.91□□□□□ -0.34
MRPL54Q6P161 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 CR392000.1-201ENST00000624770 1228 ntBASIC12.91□□□□□ -0.34
MRPL54Q6P161 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 C8orf49-201ENST00000525043 1968 ntBASIC12.9□□□□□ -0.34
MRPL54Q6P161 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 AL355355.2-201ENST00000442321 338 ntBASIC12.9□□□□□ -0.34
MRPL54Q6P161 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 AC026185.1-201ENST00000445748 174 ntBASIC12.9□□□□□ -0.34
MRPL54Q6P161 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 AC124947.2-201ENST00000547118 1133 ntBASIC12.9□□□□□ -0.34
MRPL54Q6P161 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 MIR3180-4-201ENST00000582223 153 ntBASIC12.9□□□□□ -0.34
MRPL54Q6P161 AC008687.5-201ENST00000593746 558 ntBASIC12.9□□□□□ -0.34
MRPL54Q6P161 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
MRPL54Q6P161 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MRPL54Q6P161 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
MRPL54Q6P161 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
MRPL54Q6P161 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
MRPL54Q6P161 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.9□□□□□ -0.35
MRPL54Q6P161 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
MRPL54Q6P161 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.89□□□□□ -0.35
MRPL54Q6P161 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.89□□□□□ -0.35
MRPL54Q6P161 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.89□□□□□ -0.35
MRPL54Q6P161 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.89□□□□□ -0.35
MRPL54Q6P161 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL54Q6P161 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.89□□□□□ -0.35
MRPL54Q6P161 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
MRPL54Q6P161 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.89□□□□□ -0.35
MRPL54Q6P161 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL54Q6P161 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL54Q6P161 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
MRPL54Q6P161 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL54Q6P161 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
MRPL54Q6P161 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms