Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
USH1GQ495M9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.49■□□□□ 0.71
USH1GQ495M9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
USH1GQ495M9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.49■□□□□ 0.71
USH1GQ495M9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
USH1GQ495M9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USH1GQ495M9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USH1GQ495M9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USH1GQ495M9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.48■□□□□ 0.71
USH1GQ495M9 LINC02012-201ENST00000608206 1725 ntBASIC19.48■□□□□ 0.71
USH1GQ495M9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USH1GQ495M9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USH1GQ495M9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
USH1GQ495M9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
USH1GQ495M9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.48■□□□□ 0.71
USH1GQ495M9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
USH1GQ495M9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
USH1GQ495M9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
USH1GQ495M9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
USH1GQ495M9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.48■□□□□ 0.71
USH1GQ495M9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.48■□□□□ 0.71
USH1GQ495M9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.48■□□□□ 0.71
USH1GQ495M9 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
USH1GQ495M9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.48■□□□□ 0.71
USH1GQ495M9 MIR4515-201ENST00000584082 81 ntBASIC19.48■□□□□ 0.71
USH1GQ495M9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.48■□□□□ 0.71
USH1GQ495M9 AL645728.2-201ENST00000641974 660 ntBASIC19.48■□□□□ 0.71
USH1GQ495M9 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.48■□□□□ 0.71
USH1GQ495M9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USH1GQ495M9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.48■□□□□ 0.71
USH1GQ495M9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
USH1GQ495M9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USH1GQ495M9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
USH1GQ495M9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USH1GQ495M9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.48■□□□□ 0.71
USH1GQ495M9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
USH1GQ495M9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.47■□□□□ 0.71
USH1GQ495M9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.47■□□□□ 0.71
USH1GQ495M9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.47■□□□□ 0.71
USH1GQ495M9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.47■□□□□ 0.71
USH1GQ495M9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
USH1GQ495M9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.47■□□□□ 0.71
USH1GQ495M9 DUX4L17-201ENST00000557360 1267 ntBASIC19.47■□□□□ 0.71
USH1GQ495M9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.47■□□□□ 0.71
USH1GQ495M9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.47■□□□□ 0.71
USH1GQ495M9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
USH1GQ495M9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
USH1GQ495M9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
USH1GQ495M9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
USH1GQ495M9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
USH1GQ495M9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
USH1GQ495M9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
USH1GQ495M9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.47■□□□□ 0.71
USH1GQ495M9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.47■□□□□ 0.71
USH1GQ495M9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.47■□□□□ 0.71
USH1GQ495M9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
USH1GQ495M9 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
USH1GQ495M9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.47■□□□□ 0.71
USH1GQ495M9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.47■□□□□ 0.71
USH1GQ495M9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USH1GQ495M9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USH1GQ495M9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USH1GQ495M9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.46■□□□□ 0.71
USH1GQ495M9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USH1GQ495M9 AC012569.1-201ENST00000591191 1524 ntBASIC19.46■□□□□ 0.71
USH1GQ495M9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
USH1GQ495M9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USH1GQ495M9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USH1GQ495M9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USH1GQ495M9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USH1GQ495M9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USH1GQ495M9 HMGA1P7-201ENST00000406908 502 ntBASIC19.46■□□□□ 0.71
USH1GQ495M9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.46■□□□□ 0.71
USH1GQ495M9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.46■□□□□ 0.71
USH1GQ495M9 AC254562.1-201ENST00000417586 456 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms