Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PRAMEP78395 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PRAMEP78395 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEP78395 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PRAMEP78395 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PRAMEP78395 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PRAMEP78395 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEP78395 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.21■□□□□ 0.35
PRAMEP78395 TSPY19P-201ENST00000418461 509 ntBASIC17.21■□□□□ 0.35
PRAMEP78395 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.21■□□□□ 0.35
PRAMEP78395 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.21■□□□□ 0.35
PRAMEP78395 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PRAMEP78395 TSPY18P-201ENST00000441642 509 ntBASIC17.21■□□□□ 0.35
PRAMEP78395 BX005266.1-201ENST00000473402 457 ntBASIC17.21■□□□□ 0.35
PRAMEP78395 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PRAMEP78395 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEP78395 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.21■□□□□ 0.35
PRAMEP78395 MTDHP3-201ENST00000594186 672 ntBASIC17.21■□□□□ 0.35
PRAMEP78395 AL139288.1-201ENST00000623748 933 ntBASIC17.21■□□□□ 0.35
PRAMEP78395 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 AC005915.1-201ENST00000624912 2018 ntBASIC17.21■□□□□ 0.35
PRAMEP78395 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PRAMEP78395 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PRAMEP78395 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PRAMEP78395 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.34
PRAMEP78395 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PRAMEP78395 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.21■□□□□ 0.34
PRAMEP78395 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PRAMEP78395 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 AC106886.4-201ENST00000623557 2502 ntBASIC17.2■□□□□ 0.34
PRAMEP78395 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEP78395 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEP78395 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.2■□□□□ 0.34
PRAMEP78395 AL356309.3-201ENST00000624132 1934 ntBASIC17.2■□□□□ 0.34
PRAMEP78395 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.2■□□□□ 0.34
PRAMEP78395 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 LINC00982-205ENST00000420957 435 ntBASIC17.2■□□□□ 0.34
PRAMEP78395 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.2■□□□□ 0.34
PRAMEP78395 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.2■□□□□ 0.34
PRAMEP78395 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.2■□□□□ 0.34
PRAMEP78395 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.2■□□□□ 0.34
PRAMEP78395 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEP78395 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEP78395 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEP78395 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PRAMEP78395 AC105020.1-201ENST00000435356 2205 ntBASIC17.2■□□□□ 0.34
PRAMEP78395 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEP78395 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PRAMEP78395 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.2■□□□□ 0.34
PRAMEP78395 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEP78395 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEP78395 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEP78395 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PRAMEP78395 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEP78395 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PRAMEP78395 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEP78395 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEP78395 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.19■□□□□ 0.34
PRAMEP78395 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms