Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
PAX9P55771 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PAX9P55771 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PAX9P55771 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 AC126177.1-201ENST00000547829 2218 ntBASIC13.7□□□□□ -0.22
PAX9P55771 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PAX9P55771 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PAX9P55771 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
PAX9P55771 KRT18P22-201ENST00000402024 1347 ntBASIC13.69□□□□□ -0.22
PAX9P55771 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.69□□□□□ -0.22
PAX9P55771 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.69□□□□□ -0.22
PAX9P55771 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
PAX9P55771 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PAX9P55771 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
PAX9P55771 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 FAM8A6P-201ENST00000407496 1135 ntBASIC13.69□□□□□ -0.22
PAX9P55771 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PAX9P55771 HLA-J-202ENST00000469281 1241 ntBASIC13.69□□□□□ -0.22
PAX9P55771 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PAX9P55771 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.69□□□□□ -0.22
PAX9P55771 DUX4L17-201ENST00000557360 1267 ntBASIC13.69□□□□□ -0.22
PAX9P55771 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.69□□□□□ -0.22
PAX9P55771 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.69□□□□□ -0.22
PAX9P55771 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 AC009336.1-201ENST00000608941 1553 ntBASIC13.69□□□□□ -0.22
PAX9P55771 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 AC023824.1-201ENST00000562945 2975 ntBASIC13.69□□□□□ -0.22
PAX9P55771 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
PAX9P55771 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.69□□□□□ -0.22
PAX9P55771 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 LINC01568-207ENST00000641790 1380 ntBASIC13.69□□□□□ -0.22
PAX9P55771 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PAX9P55771 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PAX9P55771 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
PAX9P55771 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.68□□□□□ -0.22
PAX9P55771 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PAX9P55771 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.68□□□□□ -0.22
PAX9P55771 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PAX9P55771 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.68□□□□□ -0.22
PAX9P55771 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PAX9P55771 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PAX9P55771 AC125634.1-201ENST00000438758 1403 ntBASIC13.68□□□□□ -0.22
PAX9P55771 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PAX9P55771 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.68□□□□□ -0.22
PAX9P55771 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
PAX9P55771 AL441883.1-201ENST00000566170 1045 ntBASIC13.68□□□□□ -0.22
PAX9P55771 AL603832.2-201ENST00000566195 2125 ntBASIC13.68□□□□□ -0.22
PAX9P55771 AC005332.3-201ENST00000589904 676 ntBASIC13.68□□□□□ -0.22
PAX9P55771 AC140113.3-201ENST00000605663 199 ntBASIC13.68□□□□□ -0.22
PAX9P55771 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 AL596087.1-201ENST00000400979 1969 ntBASIC13.68□□□□□ -0.22
PAX9P55771 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.68□□□□□ -0.22
PAX9P55771 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PAX9P55771 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.68□□□□□ -0.22
PAX9P55771 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms