Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NEK3P51956 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NEK3P51956 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.59■□□□□ 0.41
NEK3P51956 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NEK3P51956 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NEK3P51956 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.59■□□□□ 0.41
NEK3P51956 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.59■□□□□ 0.41
NEK3P51956 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.59■□□□□ 0.41
NEK3P51956 SIGLEC30P-201ENST00000455569 941 ntBASIC17.59■□□□□ 0.41
NEK3P51956 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.59■□□□□ 0.41
NEK3P51956 AC092910.1-201ENST00000482027 1129 ntBASIC17.59■□□□□ 0.41
NEK3P51956 STK19B-204ENST00000512515 211 ntBASIC17.59■□□□□ 0.41
NEK3P51956 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.59■□□□□ 0.41
NEK3P51956 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.59■□□□□ 0.41
NEK3P51956 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.59■□□□□ 0.41
NEK3P51956 AC105339.3-201ENST00000560043 636 ntBASIC17.59■□□□□ 0.41
NEK3P51956 AC012640.2-201ENST00000561606 901 ntBASIC17.59■□□□□ 0.41
NEK3P51956 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.59■□□□□ 0.41
NEK3P51956 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.59■□□□□ 0.41
NEK3P51956 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.59■□□□□ 0.41
NEK3P51956 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.59■□□□□ 0.41
NEK3P51956 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
NEK3P51956 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NEK3P51956 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
NEK3P51956 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEK3P51956 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.59■□□□□ 0.41
NEK3P51956 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEK3P51956 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEK3P51956 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NEK3P51956 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NEK3P51956 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEK3P51956 AC148477.5-201ENST00000625164 1645 ntBASIC17.58■□□□□ 0.41
NEK3P51956 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NEK3P51956 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEK3P51956 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEK3P51956 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEK3P51956 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.58■□□□□ 0.4
NEK3P51956 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NEK3P51956 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.58■□□□□ 0.4
NEK3P51956 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEK3P51956 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NEK3P51956 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.58■□□□□ 0.4
NEK3P51956 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.58■□□□□ 0.4
NEK3P51956 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.58■□□□□ 0.4
NEK3P51956 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.58■□□□□ 0.4
NEK3P51956 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.58■□□□□ 0.4
NEK3P51956 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.58■□□□□ 0.4
NEK3P51956 AC006557.2-201ENST00000592985 1240 ntBASIC17.58■□□□□ 0.4
NEK3P51956 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEK3P51956 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.58■□□□□ 0.4
NEK3P51956 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NEK3P51956 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NEK3P51956 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEK3P51956 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
NEK3P51956 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEK3P51956 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEK3P51956 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEK3P51956 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NEK3P51956 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NEK3P51956 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.58■□□□□ 0.4
NEK3P51956 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.58■□□□□ 0.4
NEK3P51956 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEK3P51956 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEK3P51956 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEK3P51956 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.57■□□□□ 0.4
NEK3P51956 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEK3P51956 AC005915.1-201ENST00000624912 2018 ntBASIC17.57■□□□□ 0.4
NEK3P51956 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.57■□□□□ 0.4
NEK3P51956 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEK3P51956 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NEK3P51956 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NEK3P51956 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEK3P51956 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NEK3P51956 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
NEK3P51956 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.57■□□□□ 0.4
NEK3P51956 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NEK3P51956 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
NEK3P51956 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEK3P51956 AC098831.1-202ENST00000438821 336 ntBASIC17.57■□□□□ 0.4
NEK3P51956 RPL13AP23-201ENST00000480739 586 ntBASIC17.57■□□□□ 0.4
NEK3P51956 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.57■□□□□ 0.4
NEK3P51956 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.57■□□□□ 0.4
NEK3P51956 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.57■□□□□ 0.4
NEK3P51956 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NEK3P51956 AL589182.2-201ENST00000619332 1049 ntBASIC17.57■□□□□ 0.4
NEK3P51956 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEK3P51956 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NEK3P51956 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NEK3P51956 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEK3P51956 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms