Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF144AP50876 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.87■□□□□ 0.13
RNF144AP50876 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
RNF144AP50876 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF144AP50876 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RNF144AP50876 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RNF144AP50876 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 FLJ38576-201ENST00000623820 2459 ntBASIC15.87■□□□□ 0.13
RNF144AP50876 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RNF144AP50876 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF144AP50876 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF144AP50876 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.87■□□□□ 0.13
RNF144AP50876 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RNF144AP50876 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
RNF144AP50876 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RNF144AP50876 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF144AP50876 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF144AP50876 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF144AP50876 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF144AP50876 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RNF144AP50876 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RNF144AP50876 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF144AP50876 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
RNF144AP50876 AF238378.1-201ENST00000526806 358 ntBASIC15.86■□□□□ 0.13
RNF144AP50876 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF144AP50876 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF144AP50876 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF144AP50876 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF144AP50876 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RNF144AP50876 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF144AP50876 EGFEM1P-202ENST00000431685 1563 ntBASIC15.86■□□□□ 0.13
RNF144AP50876 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RNF144AP50876 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 AC105020.1-201ENST00000435356 2205 ntBASIC15.86■□□□□ 0.13
RNF144AP50876 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF144AP50876 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
RNF144AP50876 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RNF144AP50876 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF144AP50876 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF144AP50876 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF144AP50876 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
RNF144AP50876 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF144AP50876 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF144AP50876 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RNF144AP50876 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
RNF144AP50876 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF144AP50876 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RNF144AP50876 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF144AP50876 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF144AP50876 LINC00982-205ENST00000420957 435 ntBASIC15.85■□□□□ 0.13
RNF144AP50876 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF144AP50876 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
RNF144AP50876 EMBP1-201ENST00000458200 901 ntBASIC15.85■□□□□ 0.13
RNF144AP50876 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF144AP50876 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms