Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.56■□□□□ 0.56
CASP4P49662 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CASP4P49662 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.55■□□□□ 0.56
CASP4P49662 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CASP4P49662 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CASP4P49662 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.55■□□□□ 0.56
CASP4P49662 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 OR6D1P-202ENST00000641007 5290 ntBASIC18.55■□□□□ 0.56
CASP4P49662 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 PCDHA14-201ENST00000506751 2298 ntBASIC18.55■□□□□ 0.56
CASP4P49662 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.55■□□□□ 0.56
CASP4P49662 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.55■□□□□ 0.56
CASP4P49662 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 SLC25A6P2-201ENST00000497974 877 ntBASIC18.55■□□□□ 0.56
CASP4P49662 AC136632.2-201ENST00000512891 861 ntBASIC18.55■□□□□ 0.56
CASP4P49662 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.55■□□□□ 0.56
CASP4P49662 AL356488.2-201ENST00000602755 427 ntBASIC18.55■□□□□ 0.56
CASP4P49662 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CASP4P49662 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CASP4P49662 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASP4P49662 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.55■□□□□ 0.56
CASP4P49662 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.55■□□□□ 0.56
CASP4P49662 AC002310.6-201ENST00000624451 1377 ntBASIC18.55■□□□□ 0.56
CASP4P49662 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.54■□□□□ 0.56
CASP4P49662 UBALD1-205ENST00000590891 2641 ntBASIC18.54■□□□□ 0.56
CASP4P49662 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.54■□□□□ 0.56
CASP4P49662 TUBB8P12-201ENST00000308911 1335 ntBASIC18.54■□□□□ 0.56
CASP4P49662 TUBB7P-202ENST00000428444 1305 ntBASIC18.54■□□□□ 0.56
CASP4P49662 TUBB8P7-204ENST00000567960 1332 ntBASIC18.54■□□□□ 0.56
CASP4P49662 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CASP4P49662 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CASP4P49662 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.54■□□□□ 0.56
CASP4P49662 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.54■□□□□ 0.56
CASP4P49662 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.54■□□□□ 0.56
CASP4P49662 FDX1P1-201ENST00000449115 551 ntBASIC18.54■□□□□ 0.56
CASP4P49662 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.54■□□□□ 0.56
CASP4P49662 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.54■□□□□ 0.56
CASP4P49662 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.54■□□□□ 0.56
CASP4P49662 AP001005.1-201ENST00000571755 1248 ntBASIC18.54■□□□□ 0.56
CASP4P49662 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CASP4P49662 AC116407.3-201ENST00000623905 1129 ntBASIC18.54■□□□□ 0.56
CASP4P49662 AC117500.6-201ENST00000624871 588 ntBASIC18.54■□□□□ 0.56
CASP4P49662 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.54■□□□□ 0.56
CASP4P49662 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CASP4P49662 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASP4P49662 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CASP4P49662 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASP4P49662 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CASP4P49662 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CASP4P49662 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CASP4P49662 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASP4P49662 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CASP4P49662 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CASP4P49662 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASP4P49662 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CASP4P49662 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASP4P49662 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASP4P49662 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.53■□□□□ 0.56
CASP4P49662 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.53■□□□□ 0.56
CASP4P49662 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.53■□□□□ 0.56
CASP4P49662 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CASP4P49662 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.53■□□□□ 0.56
CASP4P49662 AL603756.1-201ENST00000606511 2163 ntBASIC18.53■□□□□ 0.56
CASP4P49662 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.53■□□□□ 0.56
CASP4P49662 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.53■□□□□ 0.56
CASP4P49662 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.53■□□□□ 0.56
CASP4P49662 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.53■□□□□ 0.56
CASP4P49662 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CASP4P49662 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms