Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AF228730.7-201ENST00000641842 219 ntBASIC13.92□□□□□ -0.18
CEACAM3P40198 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CEACAM3P40198 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.92□□□□□ -0.18
CEACAM3P40198 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.92□□□□□ -0.18
CEACAM3P40198 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.92□□□□□ -0.18
CEACAM3P40198 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CEACAM3P40198 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.92□□□□□ -0.18
CEACAM3P40198 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 AL590787.1-201ENST00000568856 1315 ntBASIC13.91□□□□□ -0.18
CEACAM3P40198 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CEACAM3P40198 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.91□□□□□ -0.18
CEACAM3P40198 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.91□□□□□ -0.18
CEACAM3P40198 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.91□□□□□ -0.18
CEACAM3P40198 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 AC124947.2-201ENST00000547118 1133 ntBASIC13.91□□□□□ -0.18
CEACAM3P40198 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CEACAM3P40198 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.91□□□□□ -0.18
CEACAM3P40198 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 AL356488.2-201ENST00000602755 427 ntBASIC13.91□□□□□ -0.18
CEACAM3P40198 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 AC099398.1-201ENST00000567919 2776 ntBASIC13.91□□□□□ -0.18
CEACAM3P40198 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CEACAM3P40198 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CEACAM3P40198 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.91□□□□□ -0.18
CEACAM3P40198 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.9□□□□□ -0.18
CEACAM3P40198 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CEACAM3P40198 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CEACAM3P40198 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CEACAM3P40198 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.9□□□□□ -0.18
CEACAM3P40198 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CEACAM3P40198 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
CEACAM3P40198 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM3P40198 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CEACAM3P40198 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CEACAM3P40198 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.9□□□□□ -0.18
CEACAM3P40198 PP12613-201ENST00000424958 2230 ntBASIC13.9□□□□□ -0.18
CEACAM3P40198 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.9□□□□□ -0.18
CEACAM3P40198 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM3P40198 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM3P40198 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM3P40198 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CEACAM3P40198 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM3P40198 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.9□□□□□ -0.18
CEACAM3P40198 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.9□□□□□ -0.18
CEACAM3P40198 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.9□□□□□ -0.18
CEACAM3P40198 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.9□□□□□ -0.18
CEACAM3P40198 FAM215A-202ENST00000632077 792 ntBASIC13.9□□□□□ -0.18
CEACAM3P40198 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.9□□□□□ -0.18
CEACAM3P40198 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM3P40198 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms