Protein–RNA interactions for Protein: P31268

HOXA7, Homeobox protein Hox-A7, humanhuman

Predicted RBP Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA7P31268 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.67■□□□□ 0.74
HOXA7P31268 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXA7P31268 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA7P31268 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
HOXA7P31268 AC012569.1-201ENST00000591191 1524 ntBASIC19.66■□□□□ 0.74
HOXA7P31268 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.66■□□□□ 0.74
HOXA7P31268 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA7P31268 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA7P31268 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HOXA7P31268 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
HOXA7P31268 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXA7P31268 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA7P31268 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXA7P31268 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HOXA7P31268 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXA7P31268 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXA7P31268 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
HOXA7P31268 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXA7P31268 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HOXA7P31268 PMS2P4-201ENST00000412466 1052 ntBASIC19.65■□□□□ 0.74
HOXA7P31268 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
HOXA7P31268 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXA7P31268 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXA7P31268 AC093214.1-201ENST00000511688 1107 ntBASIC19.65■□□□□ 0.74
HOXA7P31268 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXA7P31268 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXA7P31268 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HOXA7P31268 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXA7P31268 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA7P31268 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
HOXA7P31268 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HOXA7P31268 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA7P31268 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA7P31268 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HOXA7P31268 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA7P31268 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA7P31268 RBPMS2P1-201ENST00000437762 623 ntBASIC19.64■□□□□ 0.73
HOXA7P31268 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HOXA7P31268 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.64■□□□□ 0.73
HOXA7P31268 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXA7P31268 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA7P31268 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA7P31268 AC239800.4-201ENST00000603712 296 ntBASIC19.64■□□□□ 0.73
HOXA7P31268 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA7P31268 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.64■□□□□ 0.73
HOXA7P31268 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXA7P31268 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA7P31268 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA7P31268 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA7P31268 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXA7P31268 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA7P31268 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HOXA7P31268 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA7P31268 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA7P31268 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA7P31268 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA7P31268 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA7P31268 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA7P31268 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.64■□□□□ 0.73
HOXA7P31268 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA7P31268 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HOXA7P31268 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA7P31268 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA7P31268 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXA7P31268 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXA7P31268 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms