Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.65□□□□□ -0.06
CD40P25942 AC112191.1-201ENST00000523689 701 ntBASIC14.65□□□□□ -0.06
CD40P25942 SNHG9-202ENST00000564014 471 ntBASIC14.65□□□□□ -0.06
CD40P25942 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.65□□□□□ -0.06
CD40P25942 AL596442.2-201ENST00000610240 980 ntBASIC14.65□□□□□ -0.06
CD40P25942 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.65□□□□□ -0.06
CD40P25942 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.65□□□□□ -0.06
CD40P25942 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CD40P25942 AC092919.2-201ENST00000623631 1645 ntBASIC14.65□□□□□ -0.06
CD40P25942 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.65□□□□□ -0.06
CD40P25942 FRMD8P1-201ENST00000440433 1524 ntBASIC14.65□□□□□ -0.06
CD40P25942 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.65□□□□□ -0.06
CD40P25942 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CD40P25942 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.65□□□□□ -0.07
CD40P25942 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
CD40P25942 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
CD40P25942 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.64□□□□□ -0.07
CD40P25942 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 AL353732.1-201ENST00000569618 1459 ntBASIC14.64□□□□□ -0.07
CD40P25942 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CD40P25942 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CD40P25942 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CD40P25942 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CD40P25942 TOP3BP1-201ENST00000420768 1380 ntBASIC14.64□□□□□ -0.07
CD40P25942 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 AC254562.1-201ENST00000417586 456 ntBASIC14.64□□□□□ -0.07
CD40P25942 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.64□□□□□ -0.07
CD40P25942 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.64□□□□□ -0.07
CD40P25942 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.64□□□□□ -0.07
CD40P25942 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
CD40P25942 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.64□□□□□ -0.07
CD40P25942 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.64□□□□□ -0.07
CD40P25942 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.64□□□□□ -0.07
CD40P25942 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.64□□□□□ -0.07
CD40P25942 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.64□□□□□ -0.07
CD40P25942 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.64□□□□□ -0.07
CD40P25942 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.64□□□□□ -0.07
CD40P25942 AC092902.6-201ENST00000641783 218 ntBASIC14.64□□□□□ -0.07
CD40P25942 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CD40P25942 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CD40P25942 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
CD40P25942 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.64□□□□□ -0.07
CD40P25942 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD40P25942 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.63□□□□□ -0.07
CD40P25942 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
CD40P25942 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.63□□□□□ -0.07
CD40P25942 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD40P25942 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD40P25942 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD40P25942 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD40P25942 AL021920.2-201ENST00000624828 1351 ntBASIC14.63□□□□□ -0.07
CD40P25942 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.63□□□□□ -0.07
CD40P25942 AC012569.1-201ENST00000591191 1524 ntBASIC14.63□□□□□ -0.07
CD40P25942 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.63□□□□□ -0.07
CD40P25942 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD40P25942 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.63□□□□□ -0.07
CD40P25942 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD40P25942 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD40P25942 AC002056.1-201ENST00000395613 760 ntBASIC14.63□□□□□ -0.07
CD40P25942 AC140658.5-201ENST00000438532 169 ntBASIC14.63□□□□□ -0.07
CD40P25942 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.63□□□□□ -0.07
CD40P25942 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD40P25942 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.63□□□□□ -0.07
CD40P25942 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.63□□□□□ -0.07
CD40P25942 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD40P25942 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CD40P25942 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CD40P25942 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD40P25942 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.63□□□□□ -0.07
CD40P25942 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD40P25942 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms