Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KCNA3P22001 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KCNA3P22001 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.61■□□□□ 0.89
KCNA3P22001 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNA3P22001 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNA3P22001 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KCNA3P22001 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KCNA3P22001 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNA3P22001 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
KCNA3P22001 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNA3P22001 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNA3P22001 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.6■□□□□ 0.89
KCNA3P22001 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNA3P22001 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
KCNA3P22001 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
KCNA3P22001 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
KCNA3P22001 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
KCNA3P22001 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
KCNA3P22001 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 CYP2A7P1-201ENST00000595391 815 ntBASIC20.6■□□□□ 0.89
KCNA3P22001 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.6■□□□□ 0.89
KCNA3P22001 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNA3P22001 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.6■□□□□ 0.89
KCNA3P22001 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNA3P22001 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
KCNA3P22001 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.6■□□□□ 0.89
KCNA3P22001 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNA3P22001 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNA3P22001 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.59■□□□□ 0.89
KCNA3P22001 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.59■□□□□ 0.89
KCNA3P22001 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KCNA3P22001 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNA3P22001 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
KCNA3P22001 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNA3P22001 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
KCNA3P22001 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
KCNA3P22001 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.59■□□□□ 0.89
KCNA3P22001 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KCNA3P22001 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNA3P22001 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNA3P22001 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNA3P22001 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.59■□□□□ 0.89
KCNA3P22001 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.59■□□□□ 0.89
KCNA3P22001 AC114501.2-201ENST00000439631 535 ntBASIC20.59■□□□□ 0.89
KCNA3P22001 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.59■□□□□ 0.89
KCNA3P22001 FAM8A2P-201ENST00000528813 1142 ntBASIC20.59■□□□□ 0.89
KCNA3P22001 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KCNA3P22001 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.59■□□□□ 0.89
KCNA3P22001 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNA3P22001 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.59■□□□□ 0.89
KCNA3P22001 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.59■□□□□ 0.89
KCNA3P22001 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KCNA3P22001 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.59■□□□□ 0.89
KCNA3P22001 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNA3P22001 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KCNA3P22001 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
KCNA3P22001 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
KCNA3P22001 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
KCNA3P22001 AL133338.1-201ENST00000565695 1517 ntBASIC20.58■□□□□ 0.89
KCNA3P22001 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA3P22001 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA3P22001 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA3P22001 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA3P22001 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA3P22001 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
KCNA3P22001 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNA3P22001 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNA3P22001 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNA3P22001 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA3P22001 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA3P22001 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA3P22001 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
KCNA3P22001 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
KCNA3P22001 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.58■□□□□ 0.89
KCNA3P22001 ELK1P1-201ENST00000485699 580 ntBASIC20.58■□□□□ 0.89
KCNA3P22001 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
KCNA3P22001 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNA3P22001 AP005482.1-201ENST00000563722 1273 ntBASIC20.58■□□□□ 0.89
KCNA3P22001 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNA3P22001 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNA3P22001 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.58■□□□□ 0.89
KCNA3P22001 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.58■□□□□ 0.89
KCNA3P22001 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA3P22001 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.58■□□□□ 0.88
KCNA3P22001 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
KCNA3P22001 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNA3P22001 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms