Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP4AP20648 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP4AP20648 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP4AP20648 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.83■□□□□ 0.6
ATP4AP20648 AC012569.1-201ENST00000591191 1524 ntBASIC18.83■□□□□ 0.6
ATP4AP20648 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP4AP20648 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.83■□□□□ 0.6
ATP4AP20648 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.83■□□□□ 0.6
ATP4AP20648 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ATP4AP20648 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ATP4AP20648 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP4AP20648 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
ATP4AP20648 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP4AP20648 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP4AP20648 AL121761.2-201ENST00000598007 1648 ntBASIC18.82■□□□□ 0.6
ATP4AP20648 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
ATP4AP20648 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ATP4AP20648 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP4AP20648 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.82■□□□□ 0.6
ATP4AP20648 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.82■□□□□ 0.6
ATP4AP20648 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.82■□□□□ 0.6
ATP4AP20648 SNHG9-202ENST00000564014 471 ntBASIC18.82■□□□□ 0.6
ATP4AP20648 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP4AP20648 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.82■□□□□ 0.6
ATP4AP20648 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP4AP20648 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP4AP20648 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ATP4AP20648 AC027612.4-201ENST00000605371 583 ntBASIC18.82■□□□□ 0.6
ATP4AP20648 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.82■□□□□ 0.6
ATP4AP20648 AL513210.1-201ENST00000629608 234 ntBASIC18.82■□□□□ 0.6
ATP4AP20648 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP4AP20648 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
ATP4AP20648 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP4AP20648 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.82■□□□□ 0.6
ATP4AP20648 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP4AP20648 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP4AP20648 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ATP4AP20648 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP4AP20648 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP4AP20648 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP4AP20648 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP4AP20648 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.81■□□□□ 0.6
ATP4AP20648 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.81■□□□□ 0.6
ATP4AP20648 AC112191.1-201ENST00000523689 701 ntBASIC18.81■□□□□ 0.6
ATP4AP20648 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
ATP4AP20648 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.81■□□□□ 0.6
ATP4AP20648 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ATP4AP20648 MPDU1-223ENST00000582151 728 ntBASIC18.81■□□□□ 0.6
ATP4AP20648 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ATP4AP20648 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP4AP20648 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP4AP20648 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.81■□□□□ 0.6
ATP4AP20648 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.81■□□□□ 0.6
ATP4AP20648 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ATP4AP20648 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 KRT8P49-201ENST00000604166 1432 ntBASIC18.81■□□□□ 0.6
ATP4AP20648 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ATP4AP20648 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ATP4AP20648 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP4AP20648 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP4AP20648 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP4AP20648 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP4AP20648 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATP4AP20648 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATP4AP20648 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP4AP20648 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP4AP20648 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP4AP20648 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP4AP20648 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP4AP20648 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP4AP20648 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms