Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB4AP20338 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB4AP20338 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB4AP20338 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB4AP20338 AL731571.1-201ENST00000617058 5428 ntBASIC13.1□□□□□ -0.31
RAB4AP20338 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
RAB4AP20338 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB4AP20338 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.1□□□□□ -0.31
RAB4AP20338 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB4AP20338 AC006058.4-201ENST00000624016 1670 ntBASIC13.1□□□□□ -0.31
RAB4AP20338 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.1□□□□□ -0.31
RAB4AP20338 AC004951.3-201ENST00000418645 1148 ntBASIC13.1□□□□□ -0.31
RAB4AP20338 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB4AP20338 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB4AP20338 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.1□□□□□ -0.31
RAB4AP20338 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB4AP20338 AC083880.1-201ENST00000608266 535 ntBASIC13.1□□□□□ -0.31
RAB4AP20338 AC008622.2-201ENST00000617006 1229 ntBASIC13.1□□□□□ -0.31
RAB4AP20338 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB4AP20338 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB4AP20338 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB4AP20338 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RAB4AP20338 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB4AP20338 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB4AP20338 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB4AP20338 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RAB4AP20338 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB4AP20338 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RAB4AP20338 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
RAB4AP20338 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB4AP20338 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB4AP20338 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RAB4AP20338 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RAB4AP20338 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RAB4AP20338 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB4AP20338 AL023284.2-201ENST00000405850 579 ntBASIC13.09□□□□□ -0.31
RAB4AP20338 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RAB4AP20338 MCCD1P1-208ENST00000445732 328 ntBASIC13.09□□□□□ -0.31
RAB4AP20338 KRT16P5-201ENST00000455284 522 ntBASIC13.09□□□□□ -0.31
RAB4AP20338 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.09□□□□□ -0.31
RAB4AP20338 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB4AP20338 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB4AP20338 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB4AP20338 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RAB4AP20338 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.09□□□□□ -0.31
RAB4AP20338 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB4AP20338 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB4AP20338 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
RAB4AP20338 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB4AP20338 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB4AP20338 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RAB4AP20338 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.31
RAB4AP20338 AL359258.3-201ENST00000622910 2331 ntBASIC13.08□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms