Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.03■□□□□ 0.32
XRCC1P18887 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.03■□□□□ 0.32
XRCC1P18887 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.03■□□□□ 0.32
XRCC1P18887 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.03■□□□□ 0.32
XRCC1P18887 AC105339.3-201ENST00000560043 636 ntBASIC17.03■□□□□ 0.32
XRCC1P18887 AC012640.2-201ENST00000561606 901 ntBASIC17.03■□□□□ 0.32
XRCC1P18887 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
XRCC1P18887 AL589182.2-201ENST00000619332 1049 ntBASIC17.03■□□□□ 0.32
XRCC1P18887 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.03■□□□□ 0.32
XRCC1P18887 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
XRCC1P18887 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
XRCC1P18887 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
XRCC1P18887 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
XRCC1P18887 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
XRCC1P18887 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
XRCC1P18887 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
XRCC1P18887 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.02■□□□□ 0.32
XRCC1P18887 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
XRCC1P18887 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
XRCC1P18887 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
XRCC1P18887 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
XRCC1P18887 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
XRCC1P18887 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
XRCC1P18887 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
XRCC1P18887 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.02■□□□□ 0.32
XRCC1P18887 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.02■□□□□ 0.32
XRCC1P18887 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
XRCC1P18887 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.02■□□□□ 0.32
XRCC1P18887 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.02■□□□□ 0.32
XRCC1P18887 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.02■□□□□ 0.32
XRCC1P18887 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.02■□□□□ 0.32
XRCC1P18887 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
XRCC1P18887 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.02■□□□□ 0.32
XRCC1P18887 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.02■□□□□ 0.32
XRCC1P18887 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.02■□□□□ 0.32
XRCC1P18887 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
XRCC1P18887 AC148477.5-201ENST00000625164 1645 ntBASIC17.02■□□□□ 0.31
XRCC1P18887 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
XRCC1P18887 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
XRCC1P18887 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
XRCC1P18887 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
XRCC1P18887 AC009336.1-201ENST00000608941 1553 ntBASIC17.02■□□□□ 0.31
XRCC1P18887 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
XRCC1P18887 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
XRCC1P18887 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
XRCC1P18887 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
XRCC1P18887 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.01■□□□□ 0.31
XRCC1P18887 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
XRCC1P18887 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
XRCC1P18887 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.01■□□□□ 0.31
XRCC1P18887 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
XRCC1P18887 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
XRCC1P18887 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
XRCC1P18887 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
XRCC1P18887 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.01■□□□□ 0.31
XRCC1P18887 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
XRCC1P18887 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
XRCC1P18887 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.01■□□□□ 0.31
XRCC1P18887 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.01■□□□□ 0.31
XRCC1P18887 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
XRCC1P18887 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.01■□□□□ 0.31
XRCC1P18887 IGHV3-22-201ENST00000520721 359 ntBASIC17.01■□□□□ 0.31
XRCC1P18887 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.01■□□□□ 0.31
XRCC1P18887 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
XRCC1P18887 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.01■□□□□ 0.31
XRCC1P18887 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.01■□□□□ 0.31
XRCC1P18887 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.01■□□□□ 0.31
XRCC1P18887 LINC01451-201ENST00000623792 534 ntBASIC17.01■□□□□ 0.31
XRCC1P18887 AF228730.7-201ENST00000641842 219 ntBASIC17.01■□□□□ 0.31
XRCC1P18887 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
XRCC1P18887 REXO1L11P-201ENST00000620964 1927 ntBASIC17.01■□□□□ 0.31
XRCC1P18887 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
XRCC1P18887 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
XRCC1P18887 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
XRCC1P18887 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
XRCC1P18887 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
XRCC1P18887 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
XRCC1P18887 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.01■□□□□ 0.31
XRCC1P18887 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.01■□□□□ 0.31
XRCC1P18887 AC008741.2-201ENST00000612792 3115 ntBASIC17.01■□□□□ 0.31
XRCC1P18887 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
XRCC1P18887 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
XRCC1P18887 AC011270.2-201ENST00000624293 2550 ntBASIC17■□□□□ 0.31
XRCC1P18887 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
XRCC1P18887 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
XRCC1P18887 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
XRCC1P18887 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
XRCC1P18887 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
XRCC1P18887 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
XRCC1P18887 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17■□□□□ 0.31
XRCC1P18887 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
XRCC1P18887 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17■□□□□ 0.31
XRCC1P18887 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17■□□□□ 0.31
XRCC1P18887 RPL13AP23-201ENST00000480739 586 ntBASIC17■□□□□ 0.31
XRCC1P18887 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17■□□□□ 0.31
XRCC1P18887 AC006557.2-201ENST00000592985 1240 ntBASIC17■□□□□ 0.31
XRCC1P18887 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17■□□□□ 0.31
XRCC1P18887 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17■□□□□ 0.31
XRCC1P18887 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
XRCC1P18887 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms