Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.8■□□□□ 0.6
SMPD1P17405 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.8■□□□□ 0.6
SMPD1P17405 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.8■□□□□ 0.6
SMPD1P17405 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SMPD1P17405 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.8■□□□□ 0.6
SMPD1P17405 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.8■□□□□ 0.6
SMPD1P17405 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMPD1P17405 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SMPD1P17405 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMPD1P17405 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMPD1P17405 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.8■□□□□ 0.6
SMPD1P17405 AL138688.1-201ENST00000624851 1594 ntBASIC18.8■□□□□ 0.6
SMPD1P17405 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.8■□□□□ 0.6
SMPD1P17405 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMPD1P17405 NOC2LP1-202ENST00000452600 2235 ntBASIC18.8■□□□□ 0.6
SMPD1P17405 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
SMPD1P17405 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SMPD1P17405 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMPD1P17405 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.79■□□□□ 0.6
SMPD1P17405 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMPD1P17405 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMPD1P17405 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.79■□□□□ 0.6
SMPD1P17405 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMPD1P17405 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.79■□□□□ 0.6
SMPD1P17405 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.79■□□□□ 0.6
SMPD1P17405 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.79■□□□□ 0.6
SMPD1P17405 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.79■□□□□ 0.6
SMPD1P17405 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMPD1P17405 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMPD1P17405 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.79■□□□□ 0.6
SMPD1P17405 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.79■□□□□ 0.6
SMPD1P17405 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMPD1P17405 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMPD1P17405 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SMPD1P17405 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMPD1P17405 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMPD1P17405 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SMPD1P17405 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMPD1P17405 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SMPD1P17405 AC134043.2-201ENST00000624206 2238 ntBASIC18.78■□□□□ 0.6
SMPD1P17405 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.78■□□□□ 0.6
SMPD1P17405 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.78■□□□□ 0.6
SMPD1P17405 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.78■□□□□ 0.6
SMPD1P17405 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.78■□□□□ 0.6
SMPD1P17405 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.78■□□□□ 0.6
SMPD1P17405 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.78■□□□□ 0.6
SMPD1P17405 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.78■□□□□ 0.6
SMPD1P17405 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.78■□□□□ 0.6
SMPD1P17405 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.78■□□□□ 0.6
SMPD1P17405 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.78■□□□□ 0.6
SMPD1P17405 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.78■□□□□ 0.6
SMPD1P17405 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.78■□□□□ 0.6
SMPD1P17405 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.78■□□□□ 0.6
SMPD1P17405 AC021097.1-201ENST00000607902 574 ntBASIC18.78■□□□□ 0.6
SMPD1P17405 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMPD1P17405 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.77■□□□□ 0.6
SMPD1P17405 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMPD1P17405 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMPD1P17405 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.77■□□□□ 0.6
SMPD1P17405 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMPD1P17405 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.77■□□□□ 0.6
SMPD1P17405 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.77■□□□□ 0.6
SMPD1P17405 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMPD1P17405 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMPD1P17405 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMPD1P17405 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.77■□□□□ 0.6
SMPD1P17405 AC004890.2-204ENST00000481968 304 ntBASIC18.77■□□□□ 0.6
SMPD1P17405 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.77■□□□□ 0.6
SMPD1P17405 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.77■□□□□ 0.6
SMPD1P17405 AL035252.4-201ENST00000624174 288 ntBASIC18.77■□□□□ 0.6
SMPD1P17405 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
SMPD1P17405 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMPD1P17405 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMPD1P17405 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SMPD1P17405 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMPD1P17405 NEFHP1-201ENST00000412845 2629 ntBASIC18.77■□□□□ 0.6
SMPD1P17405 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.59
SMPD1P17405 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMPD1P17405 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.77■□□□□ 0.59
SMPD1P17405 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMPD1P17405 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMPD1P17405 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.77■□□□□ 0.59
SMPD1P17405 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms