Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.28■□□□□ 0.04
HLA-DOBP13765 AL691432.3-201ENST00000621860 400 ntBASIC15.28■□□□□ 0.04
HLA-DOBP13765 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DOBP13765 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DOBP13765 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DOBP13765 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DOBP13765 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HLA-DOBP13765 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DOBP13765 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DOBP13765 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DOBP13765 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HLA-DOBP13765 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DOBP13765 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DOBP13765 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
HLA-DOBP13765 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DOBP13765 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DOBP13765 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DOBP13765 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DOBP13765 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DOBP13765 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DOBP13765 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DOBP13765 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 RPS2P1-201ENST00000434010 821 ntBASIC15.27■□□□□ 0.04
HLA-DOBP13765 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 RN7SL510P-201ENST00000581311 263 ntBASIC15.27■□□□□ 0.04
HLA-DOBP13765 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.27■□□□□ 0.04
HLA-DOBP13765 AC004706.3-202ENST00000621574 984 ntBASIC15.27■□□□□ 0.04
HLA-DOBP13765 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DOBP13765 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DOBP13765 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.27■□□□□ 0.03
HLA-DOBP13765 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.27■□□□□ 0.03
HLA-DOBP13765 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DOBP13765 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DOBP13765 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.27■□□□□ 0.03
HLA-DOBP13765 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DOBP13765 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DOBP13765 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
HLA-DOBP13765 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.27■□□□□ 0.03
HLA-DOBP13765 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DOBP13765 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DOBP13765 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 AC243591.1-201ENST00000452967 1364 ntBASIC15.26■□□□□ 0.03
HLA-DOBP13765 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 AP002414.1-201ENST00000391405 1147 ntBASIC15.26■□□□□ 0.03
HLA-DOBP13765 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 AL450487.1-201ENST00000426799 995 ntBASIC15.26■□□□□ 0.03
HLA-DOBP13765 AC079781.3-201ENST00000449110 356 ntBASIC15.26■□□□□ 0.03
HLA-DOBP13765 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 DUX4L17-201ENST00000557360 1267 ntBASIC15.26■□□□□ 0.03
HLA-DOBP13765 AL121912.1-201ENST00000603683 238 ntBASIC15.26■□□□□ 0.03
HLA-DOBP13765 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 AC006504.4-201ENST00000592118 1568 ntBASIC15.26■□□□□ 0.03
HLA-DOBP13765 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 AC092171.3-201ENST00000610122 2651 ntBASIC15.26■□□□□ 0.03
HLA-DOBP13765 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DOBP13765 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DOBP13765 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms