Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.68■□□□□ 0.1
BMP4P12644 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.68■□□□□ 0.1
BMP4P12644 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
BMP4P12644 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
BMP4P12644 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
BMP4P12644 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.68■□□□□ 0.1
BMP4P12644 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.68■□□□□ 0.1
BMP4P12644 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.68■□□□□ 0.1
BMP4P12644 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.68■□□□□ 0.1
BMP4P12644 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.68■□□□□ 0.1
BMP4P12644 AL121772.3-201ENST00000610840 674 ntBASIC15.68■□□□□ 0.1
BMP4P12644 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.68■□□□□ 0.1
BMP4P12644 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BMP4P12644 NFIC-211ENST00000641145 8399 ntBASIC15.67■□□□□ 0.1
BMP4P12644 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
BMP4P12644 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.67■□□□□ 0.1
BMP4P12644 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.67■□□□□ 0.1
BMP4P12644 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.67■□□□□ 0.1
BMP4P12644 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
BMP4P12644 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.67■□□□□ 0.1
BMP4P12644 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
BMP4P12644 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
BMP4P12644 DRAXINP1-201ENST00000437611 948 ntBASIC15.67■□□□□ 0.1
BMP4P12644 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.67■□□□□ 0.1
BMP4P12644 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.67■□□□□ 0.1
BMP4P12644 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.67■□□□□ 0.1
BMP4P12644 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.67■□□□□ 0.1
BMP4P12644 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.67■□□□□ 0.1
BMP4P12644 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.67■□□□□ 0.1
BMP4P12644 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
BMP4P12644 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 KRT8P50-201ENST00000562022 1438 ntBASIC15.67■□□□□ 0.1
BMP4P12644 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
BMP4P12644 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.67■□□□□ 0.1
BMP4P12644 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BMP4P12644 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.67■□□□□ 0.1
BMP4P12644 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
BMP4P12644 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
BMP4P12644 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.66■□□□□ 0.1
BMP4P12644 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.66■□□□□ 0.1
BMP4P12644 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.66■□□□□ 0.1
BMP4P12644 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.66■□□□□ 0.1
BMP4P12644 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BMP4P12644 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.66■□□□□ 0.1
BMP4P12644 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms