Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
UBL4AP11441 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.81■□□□□ 0.12
UBL4AP11441 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.81■□□□□ 0.12
UBL4AP11441 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.81■□□□□ 0.12
UBL4AP11441 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.81■□□□□ 0.12
UBL4AP11441 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.81■□□□□ 0.12
UBL4AP11441 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.81■□□□□ 0.12
UBL4AP11441 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.81■□□□□ 0.12
UBL4AP11441 IFNL4P1-201ENST00000607083 540 ntBASIC15.81■□□□□ 0.12
UBL4AP11441 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
UBL4AP11441 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.81■□□□□ 0.12
UBL4AP11441 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
UBL4AP11441 AL022326.1-202ENST00000641533 845 ntBASIC15.81■□□□□ 0.12
UBL4AP11441 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
UBL4AP11441 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBL4AP11441 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
UBL4AP11441 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 AC004817.3-201ENST00000602957 2129 ntBASIC15.8■□□□□ 0.12
UBL4AP11441 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.8■□□□□ 0.12
UBL4AP11441 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.8■□□□□ 0.12
UBL4AP11441 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
UBL4AP11441 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.8■□□□□ 0.12
UBL4AP11441 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.8■□□□□ 0.12
UBL4AP11441 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.8■□□□□ 0.12
UBL4AP11441 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
UBL4AP11441 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.8■□□□□ 0.12
UBL4AP11441 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
UBL4AP11441 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.8■□□□□ 0.12
UBL4AP11441 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.8■□□□□ 0.12
UBL4AP11441 NKAPP1-205ENST00000585790 367 ntBASIC15.8■□□□□ 0.12
UBL4AP11441 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.8■□□□□ 0.12
UBL4AP11441 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
UBL4AP11441 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
UBL4AP11441 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 AD000864.1-201ENST00000624076 2295 ntBASIC15.8■□□□□ 0.12
UBL4AP11441 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.8■□□□□ 0.12
UBL4AP11441 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.8■□□□□ 0.12
UBL4AP11441 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
UBL4AP11441 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.8■□□□□ 0.12
UBL4AP11441 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBL4AP11441 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.8■□□□□ 0.12
UBL4AP11441 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
UBL4AP11441 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
UBL4AP11441 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.79■□□□□ 0.12
UBL4AP11441 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
UBL4AP11441 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
UBL4AP11441 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 AKR1C7P-201ENST00000305623 895 ntBASIC15.79■□□□□ 0.12
UBL4AP11441 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
UBL4AP11441 LINC00982-205ENST00000420957 435 ntBASIC15.79■□□□□ 0.12
UBL4AP11441 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
UBL4AP11441 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.79■□□□□ 0.12
UBL4AP11441 PRYP5-201ENST00000451909 266 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms