Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 SART3-203ENST00000546611 1184 ntBASIC17.14■□□□□ 0.33
THRAP10827 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.14■□□□□ 0.33
THRAP10827 AC021087.4-201ENST00000563761 564 ntBASIC17.14■□□□□ 0.33
THRAP10827 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.14■□□□□ 0.33
THRAP10827 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.14■□□□□ 0.33
THRAP10827 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
THRAP10827 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.14■□□□□ 0.33
THRAP10827 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
THRAP10827 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
THRAP10827 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
THRAP10827 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.14■□□□□ 0.33
THRAP10827 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
THRAP10827 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
THRAP10827 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
THRAP10827 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
THRAP10827 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
THRAP10827 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.14■□□□□ 0.33
THRAP10827 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.14■□□□□ 0.33
THRAP10827 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
THRAP10827 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
THRAP10827 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
THRAP10827 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
THRAP10827 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.14■□□□□ 0.33
THRAP10827 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
THRAP10827 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.13■□□□□ 0.33
THRAP10827 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
THRAP10827 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
THRAP10827 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.13■□□□□ 0.33
THRAP10827 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
THRAP10827 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
THRAP10827 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
THRAP10827 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
THRAP10827 AC009949.1-201ENST00000623048 1830 ntBASIC17.13■□□□□ 0.33
THRAP10827 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 RPS2P28-201ENST00000314255 741 ntBASIC17.13■□□□□ 0.33
THRAP10827 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 FAM220CP-201ENST00000395253 831 ntBASIC17.13■□□□□ 0.33
THRAP10827 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
THRAP10827 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
THRAP10827 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.13■□□□□ 0.33
THRAP10827 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
THRAP10827 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.13■□□□□ 0.33
THRAP10827 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.13■□□□□ 0.33
THRAP10827 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.13■□□□□ 0.33
THRAP10827 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.13■□□□□ 0.33
THRAP10827 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.13■□□□□ 0.33
THRAP10827 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
THRAP10827 PCDH8P1-201ENST00000428983 2773 ntBASIC17.13■□□□□ 0.33
THRAP10827 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 AC097374.2-201ENST00000618617 1306 ntBASIC17.13■□□□□ 0.33
THRAP10827 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.13■□□□□ 0.33
THRAP10827 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
THRAP10827 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.13■□□□□ 0.33
THRAP10827 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
THRAP10827 AC060834.1-201ENST00000443027 2032 ntBASIC17.13■□□□□ 0.33
THRAP10827 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THRAP10827 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
THRAP10827 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.12■□□□□ 0.33
THRAP10827 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
THRAP10827 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
THRAP10827 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 FER1L4-210ENST00000615531 5998 ntBASIC17.12■□□□□ 0.33
THRAP10827 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
THRAP10827 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 AL356309.3-201ENST00000624132 1934 ntBASIC17.12■□□□□ 0.33
THRAP10827 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.12■□□□□ 0.33
THRAP10827 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.12■□□□□ 0.33
THRAP10827 AC007967.3-201ENST00000434308 558 ntBASIC17.12■□□□□ 0.33
THRAP10827 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.12■□□□□ 0.33
THRAP10827 DDX43P3-201ENST00000441064 443 ntBASIC17.12■□□□□ 0.33
THRAP10827 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.12■□□□□ 0.33
THRAP10827 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.12■□□□□ 0.33
THRAP10827 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
THRAP10827 AC006538.3-201ENST00000612495 578 ntBASIC17.12■□□□□ 0.33
THRAP10827 AL139288.1-201ENST00000623748 933 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms