Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 VN2R19P-201ENST00000442399 1052 ntBASIC18.64■□□□□ 0.57
CLTAP09496 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 AC140113.2-201ENST00000604370 208 ntBASIC18.64■□□□□ 0.57
CLTAP09496 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.64■□□□□ 0.57
CLTAP09496 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLTAP09496 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.64■□□□□ 0.57
CLTAP09496 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 EGFEM1P-202ENST00000431685 1563 ntBASIC18.64■□□□□ 0.57
CLTAP09496 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.64■□□□□ 0.57
CLTAP09496 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.64■□□□□ 0.57
CLTAP09496 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLTAP09496 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLTAP09496 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLTAP09496 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CLTAP09496 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.63■□□□□ 0.57
CLTAP09496 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CLTAP09496 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CLTAP09496 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
CLTAP09496 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 MED15P5-201ENST00000423150 992 ntBASIC18.63■□□□□ 0.57
CLTAP09496 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.63■□□□□ 0.57
CLTAP09496 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.63■□□□□ 0.57
CLTAP09496 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.63■□□□□ 0.57
CLTAP09496 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 MIR4751-201ENST00000578027 74 ntBASIC18.63■□□□□ 0.57
CLTAP09496 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CLTAP09496 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLTAP09496 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.63■□□□□ 0.57
CLTAP09496 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.63■□□□□ 0.57
CLTAP09496 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLTAP09496 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.63■□□□□ 0.57
CLTAP09496 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.63■□□□□ 0.57
CLTAP09496 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CLTAP09496 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLTAP09496 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLTAP09496 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLTAP09496 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLTAP09496 MIR940-201ENST00000401276 94 ntBASIC18.62■□□□□ 0.57
CLTAP09496 CRYGEP-201ENST00000412192 528 ntBASIC18.62■□□□□ 0.57
CLTAP09496 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.62■□□□□ 0.57
CLTAP09496 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLTAP09496 POLD2P1-201ENST00000511220 997 ntBASIC18.62■□□□□ 0.57
CLTAP09496 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.62■□□□□ 0.57
CLTAP09496 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.62■□□□□ 0.57
CLTAP09496 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.62■□□□□ 0.57
CLTAP09496 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLTAP09496 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.62■□□□□ 0.57
CLTAP09496 AC010654.1-201ENST00000615722 808 ntBASIC18.62■□□□□ 0.57
CLTAP09496 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.62■□□□□ 0.57
CLTAP09496 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CLTAP09496 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.62■□□□□ 0.57
CLTAP09496 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.62■□□□□ 0.57
CLTAP09496 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLTAP09496 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLTAP09496 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLTAP09496 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CLTAP09496 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLTAP09496 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLTAP09496 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.62■□□□□ 0.57
CLTAP09496 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CLTAP09496 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLTAP09496 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CLTAP09496 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CLTAP09496 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLTAP09496 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CLTAP09496 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.61■□□□□ 0.57
CLTAP09496 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.61■□□□□ 0.57
CLTAP09496 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.61■□□□□ 0.57
CLTAP09496 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms