Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ACAA1P09110 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ACAA1P09110 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ACAA1P09110 AL020989.1-201ENST00000422979 469 ntBASIC14.66□□□□□ -0.06
ACAA1P09110 SIGLEC30P-201ENST00000455569 941 ntBASIC14.66□□□□□ -0.06
ACAA1P09110 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
ACAA1P09110 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.66□□□□□ -0.06
ACAA1P09110 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.66□□□□□ -0.06
ACAA1P09110 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.66□□□□□ -0.06
ACAA1P09110 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ACAA1P09110 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.66□□□□□ -0.06
ACAA1P09110 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.66□□□□□ -0.06
ACAA1P09110 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ACAA1P09110 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.66□□□□□ -0.06
ACAA1P09110 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
ACAA1P09110 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ACAA1P09110 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ACAA1P09110 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
ACAA1P09110 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
ACAA1P09110 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ACAA1P09110 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ACAA1P09110 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ACAA1P09110 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
ACAA1P09110 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ACAA1P09110 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ACAA1P09110 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.66□□□□□ -0.06
ACAA1P09110 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.66□□□□□ -0.06
ACAA1P09110 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ACAA1P09110 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ACAA1P09110 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.65□□□□□ -0.06
ACAA1P09110 LINC02228-204ENST00000642115 2962 ntBASIC14.65□□□□□ -0.06
ACAA1P09110 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ACAA1P09110 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
ACAA1P09110 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.65□□□□□ -0.06
ACAA1P09110 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ACAA1P09110 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.65□□□□□ -0.06
ACAA1P09110 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
ACAA1P09110 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ACAA1P09110 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.65□□□□□ -0.06
ACAA1P09110 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.65□□□□□ -0.06
ACAA1P09110 PRYP5-201ENST00000451909 266 ntBASIC14.65□□□□□ -0.06
ACAA1P09110 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.65□□□□□ -0.06
ACAA1P09110 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.65□□□□□ -0.06
ACAA1P09110 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.65□□□□□ -0.06
ACAA1P09110 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.65□□□□□ -0.06
ACAA1P09110 CLEC4GP1-201ENST00000596555 870 ntBASIC14.65□□□□□ -0.06
ACAA1P09110 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.65□□□□□ -0.06
ACAA1P09110 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
ACAA1P09110 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ACAA1P09110 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
ACAA1P09110 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
ACAA1P09110 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.65□□□□□ -0.06
ACAA1P09110 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ACAA1P09110 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.64□□□□□ -0.07
ACAA1P09110 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.64□□□□□ -0.07
ACAA1P09110 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.64□□□□□ -0.07
ACAA1P09110 SPDYE21P-201ENST00000413323 827 ntBASIC14.64□□□□□ -0.07
ACAA1P09110 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 TSPY19P-201ENST00000418461 509 ntBASIC14.64□□□□□ -0.07
ACAA1P09110 ACTG1P4-201ENST00000425123 1122 ntBASIC14.64□□□□□ -0.07
ACAA1P09110 TSPY18P-201ENST00000441642 509 ntBASIC14.64□□□□□ -0.07
ACAA1P09110 KRT18P31-201ENST00000506277 1292 ntBASIC14.64□□□□□ -0.07
ACAA1P09110 AC091304.2-201ENST00000564639 760 ntBASIC14.64□□□□□ -0.07
ACAA1P09110 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.64□□□□□ -0.07
ACAA1P09110 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.64□□□□□ -0.07
ACAA1P09110 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.64□□□□□ -0.07
ACAA1P09110 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.64□□□□□ -0.07
ACAA1P09110 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
ACAA1P09110 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms