Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.53■□□□□ 0.4
RHOP08100 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.53■□□□□ 0.4
RHOP08100 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.53■□□□□ 0.4
RHOP08100 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.53■□□□□ 0.4
RHOP08100 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RHOP08100 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHOP08100 AL390754.1-201ENST00000619088 582 ntBASIC17.53■□□□□ 0.4
RHOP08100 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RHOP08100 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RHOP08100 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHOP08100 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.53■□□□□ 0.4
RHOP08100 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RHOP08100 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RHOP08100 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RHOP08100 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.52■□□□□ 0.4
RHOP08100 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RHOP08100 FRMD8P1-201ENST00000440433 1524 ntBASIC17.52■□□□□ 0.4
RHOP08100 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RHOP08100 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RHOP08100 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.52■□□□□ 0.4
RHOP08100 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.52■□□□□ 0.4
RHOP08100 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RHOP08100 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
RHOP08100 AC236430.1-201ENST00000402231 743 ntBASIC17.52■□□□□ 0.4
RHOP08100 TSPY16P-201ENST00000449843 468 ntBASIC17.52■□□□□ 0.4
RHOP08100 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.52■□□□□ 0.4
RHOP08100 UGT1A2P-201ENST00000454886 866 ntBASIC17.52■□□□□ 0.4
RHOP08100 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.52■□□□□ 0.4
RHOP08100 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.52■□□□□ 0.4
RHOP08100 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.52■□□□□ 0.4
RHOP08100 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.52■□□□□ 0.4
RHOP08100 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RHOP08100 AC190387.1-201ENST00000551683 408 ntBASIC17.52■□□□□ 0.4
RHOP08100 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.52■□□□□ 0.4
RHOP08100 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.52■□□□□ 0.4
RHOP08100 AL158211.3-201ENST00000607385 239 ntBASIC17.52■□□□□ 0.4
RHOP08100 KRT8P49-201ENST00000604166 1432 ntBASIC17.52■□□□□ 0.4
RHOP08100 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.52■□□□□ 0.39
RHOP08100 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.52■□□□□ 0.39
RHOP08100 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.52■□□□□ 0.39
RHOP08100 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.52■□□□□ 0.39
RHOP08100 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.52■□□□□ 0.39
RHOP08100 AL021920.2-201ENST00000624828 1351 ntBASIC17.52■□□□□ 0.39
RHOP08100 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RHOP08100 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RHOP08100 AC116353.5-201ENST00000638148 1699 ntBASIC17.52■□□□□ 0.39
RHOP08100 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RHOP08100 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.51■□□□□ 0.39
RHOP08100 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.51■□□□□ 0.39
RHOP08100 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
RHOP08100 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.51■□□□□ 0.39
RHOP08100 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.51■□□□□ 0.39
RHOP08100 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.51■□□□□ 0.39
RHOP08100 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RHOP08100 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.51■□□□□ 0.39
RHOP08100 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.51■□□□□ 0.39
RHOP08100 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.51■□□□□ 0.39
RHOP08100 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.51■□□□□ 0.39
RHOP08100 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.51■□□□□ 0.39
RHOP08100 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.51■□□□□ 0.39
RHOP08100 AC002472.2-201ENST00000442739 958 ntBASIC17.51■□□□□ 0.39
RHOP08100 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.51■□□□□ 0.39
RHOP08100 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.51■□□□□ 0.39
RHOP08100 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.51■□□□□ 0.39
RHOP08100 AC069120.2-201ENST00000524091 540 ntBASIC17.51■□□□□ 0.39
RHOP08100 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.51■□□□□ 0.39
RHOP08100 AL138918.1-201ENST00000568306 659 ntBASIC17.51■□□□□ 0.39
RHOP08100 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RHOP08100 RN7SL204P-201ENST00000582831 262 ntBASIC17.51■□□□□ 0.39
RHOP08100 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RHOP08100 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.51■□□□□ 0.39
RHOP08100 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.51■□□□□ 0.39
RHOP08100 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RHOP08100 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RHOP08100 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RHOP08100 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RHOP08100 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.5■□□□□ 0.39
RHOP08100 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.5■□□□□ 0.39
RHOP08100 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RHOP08100 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms