Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.1■□□□□ 0.33
APOA4P06727 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.1■□□□□ 0.33
APOA4P06727 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
APOA4P06727 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.1■□□□□ 0.33
APOA4P06727 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.1■□□□□ 0.33
APOA4P06727 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
APOA4P06727 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
APOA4P06727 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.1■□□□□ 0.33
APOA4P06727 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.1■□□□□ 0.33
APOA4P06727 IFNL4P1-201ENST00000607083 540 ntBASIC17.1■□□□□ 0.33
APOA4P06727 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
APOA4P06727 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.1■□□□□ 0.33
APOA4P06727 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.1■□□□□ 0.33
APOA4P06727 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.1■□□□□ 0.33
APOA4P06727 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.1■□□□□ 0.33
APOA4P06727 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 AC079776.2-201ENST00000641154 1609 ntBASIC17.1■□□□□ 0.33
APOA4P06727 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.1■□□□□ 0.33
APOA4P06727 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
APOA4P06727 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOA4P06727 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
APOA4P06727 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.09■□□□□ 0.33
APOA4P06727 AC078925.2-201ENST00000624013 1973 ntBASIC17.09■□□□□ 0.33
APOA4P06727 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA4P06727 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APOA4P06727 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.09■□□□□ 0.33
APOA4P06727 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
APOA4P06727 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.09■□□□□ 0.33
APOA4P06727 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
APOA4P06727 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.09■□□□□ 0.33
APOA4P06727 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
APOA4P06727 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA4P06727 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APOA4P06727 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA4P06727 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APOA4P06727 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.09■□□□□ 0.33
APOA4P06727 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.09■□□□□ 0.33
APOA4P06727 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.09■□□□□ 0.33
APOA4P06727 REXO1L6P-202ENST00000619970 1078 ntBASIC17.09■□□□□ 0.33
APOA4P06727 SIGLEC16-201ENST00000599858 1437 ntBASIC17.09■□□□□ 0.33
APOA4P06727 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.09■□□□□ 0.33
APOA4P06727 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA4P06727 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.09■□□□□ 0.33
APOA4P06727 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
APOA4P06727 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA4P06727 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.09■□□□□ 0.33
APOA4P06727 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA4P06727 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.09■□□□□ 0.33
APOA4P06727 UBALD1-205ENST00000590891 2641 ntBASIC17.09■□□□□ 0.33
APOA4P06727 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA4P06727 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.09■□□□□ 0.33
APOA4P06727 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA4P06727 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA4P06727 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
APOA4P06727 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA4P06727 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOA4P06727 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
APOA4P06727 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APOA4P06727 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
APOA4P06727 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
APOA4P06727 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
APOA4P06727 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
APOA4P06727 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
APOA4P06727 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APOA4P06727 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.08■□□□□ 0.33
APOA4P06727 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APOA4P06727 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.08■□□□□ 0.33
APOA4P06727 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.08■□□□□ 0.33
APOA4P06727 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
APOA4P06727 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
APOA4P06727 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.08■□□□□ 0.32
APOA4P06727 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.08■□□□□ 0.32
APOA4P06727 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APOA4P06727 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APOA4P06727 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.08■□□□□ 0.32
APOA4P06727 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.08■□□□□ 0.32
APOA4P06727 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.08■□□□□ 0.32
APOA4P06727 SAPCD2P3-201ENST00000455031 850 ntBASIC17.08■□□□□ 0.32
APOA4P06727 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
APOA4P06727 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
APOA4P06727 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.08■□□□□ 0.32
APOA4P06727 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APOA4P06727 MTDHP3-201ENST00000594186 672 ntBASIC17.08■□□□□ 0.32
APOA4P06727 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms