Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL5A2P05997 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC22.07■■□□□ 1.12
COL5A2P05997 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL5A2P05997 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL5A2P05997 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL5A2P05997 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL5A2P05997 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC22.07■■□□□ 1.12
COL5A2P05997 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC22.07■■□□□ 1.12
COL5A2P05997 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL5A2P05997 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL5A2P05997 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC22.07■■□□□ 1.12
COL5A2P05997 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL5A2P05997 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC22.07■■□□□ 1.12
COL5A2P05997 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC22.07■■□□□ 1.12
COL5A2P05997 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
COL5A2P05997 AC108860.2-201ENST00000562760 2183 ntBASIC22.07■■□□□ 1.12
COL5A2P05997 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC22.07■■□□□ 1.12
COL5A2P05997 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL5A2P05997 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
COL5A2P05997 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC22.06■■□□□ 1.12
COL5A2P05997 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL5A2P05997 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
COL5A2P05997 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.06■■□□□ 1.12
COL5A2P05997 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC22.06■■□□□ 1.12
COL5A2P05997 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC22.06■■□□□ 1.12
COL5A2P05997 RN7SL837P-201ENST00000463010 287 ntBASIC22.06■■□□□ 1.12
COL5A2P05997 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC22.06■■□□□ 1.12
COL5A2P05997 DOC2GP-202ENST00000514950 1163 ntBASIC22.06■■□□□ 1.12
COL5A2P05997 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC22.06■■□□□ 1.12
COL5A2P05997 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
COL5A2P05997 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
COL5A2P05997 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC22.06■■□□□ 1.12
COL5A2P05997 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC22.06■■□□□ 1.12
COL5A2P05997 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL5A2P05997 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
COL5A2P05997 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL5A2P05997 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.06■■□□□ 1.12
COL5A2P05997 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC22.06■■□□□ 1.12
COL5A2P05997 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL5A2P05997 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC22.05■■□□□ 1.12
COL5A2P05997 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL5A2P05997 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC22.05■■□□□ 1.12
COL5A2P05997 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
COL5A2P05997 MIR658-201ENST00000385210 100 ntBASIC22.05■■□□□ 1.12
COL5A2P05997 RBM39-205ENST00000397370 612 ntTSL 2 BASIC22.05■■□□□ 1.12
COL5A2P05997 AC087499.6-201ENST00000411576 835 ntBASIC22.05■■□□□ 1.12
COL5A2P05997 TMEM14DP-201ENST00000422205 345 ntBASIC22.05■■□□□ 1.12
COL5A2P05997 AC055876.2-201ENST00000531834 546 ntBASIC22.05■■□□□ 1.12
COL5A2P05997 KRT17P8-201ENST00000540749 863 ntBASIC22.05■■□□□ 1.12
COL5A2P05997 MAX-210ENST00000555419 765 ntTSL 5 BASIC22.05■■□□□ 1.12
COL5A2P05997 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC22.05■■□□□ 1.12
COL5A2P05997 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL5A2P05997 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
COL5A2P05997 AL023806.1-201ENST00000603994 1649 ntBASIC22.05■■□□□ 1.12
COL5A2P05997 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC22.05■■□□□ 1.12
COL5A2P05997 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL5A2P05997 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL5A2P05997 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
COL5A2P05997 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL5A2P05997 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL5A2P05997 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC22.04■■□□□ 1.12
COL5A2P05997 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC22.04■■□□□ 1.12
COL5A2P05997 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL5A2P05997 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL5A2P05997 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC22.04■■□□□ 1.12
COL5A2P05997 AC114501.2-201ENST00000439631 535 ntBASIC22.04■■□□□ 1.12
COL5A2P05997 GLI4-203ENST00000517468 963 ntTSL 5 BASIC22.04■■□□□ 1.12
COL5A2P05997 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL5A2P05997 NAA38-206ENST00000576384 424 ntTSL 2 BASIC22.04■■□□□ 1.12
COL5A2P05997 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC22.04■■□□□ 1.12
COL5A2P05997 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
COL5A2P05997 APOC4-201ENST00000591600 348 ntTSL 3 BASIC22.04■■□□□ 1.12
COL5A2P05997 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC22.04■■□□□ 1.12
COL5A2P05997 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC22.04■■□□□ 1.12
COL5A2P05997 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC22.04■■□□□ 1.12
COL5A2P05997 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL5A2P05997 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
COL5A2P05997 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.04■■□□□ 1.12
COL5A2P05997 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL5A2P05997 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL5A2P05997 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL5A2P05997 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.04■■□□□ 1.12
COL5A2P05997 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL5A2P05997 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL5A2P05997 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL5A2P05997 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL5A2P05997 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL5A2P05997 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL5A2P05997 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL5A2P05997 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL5A2P05997 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
COL5A2P05997 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL5A2P05997 AC098859.1-201ENST00000502915 1238 ntBASIC22.03■■□□□ 1.12
COL5A2P05997 RAB35-202ENST00000534951 939 ntTSL 2 BASIC22.03■■□□□ 1.12
COL5A2P05997 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC22.03■■□□□ 1.12
COL5A2P05997 AC044860.1-202ENST00000559481 777 ntBASIC22.03■■□□□ 1.12
COL5A2P05997 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC22.03■■□□□ 1.12
COL5A2P05997 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL5A2P05997 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC22.03■■□□□ 1.12
COL5A2P05997 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms