Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 Z99916.2-201ENST00000604037 246 ntBASIC14.35□□□□□ -0.11
CD74P04233 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.35□□□□□ -0.11
CD74P04233 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.35□□□□□ -0.11
CD74P04233 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.35□□□□□ -0.11
CD74P04233 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.35□□□□□ -0.11
CD74P04233 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.35□□□□□ -0.11
CD74P04233 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CD74P04233 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CD74P04233 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.35□□□□□ -0.11
CD74P04233 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
CD74P04233 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD74P04233 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CD74P04233 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CD74P04233 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.34□□□□□ -0.11
CD74P04233 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.34□□□□□ -0.11
CD74P04233 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CD74P04233 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 CYP2D8P-201ENST00000433633 1490 ntBASIC14.34□□□□□ -0.11
CD74P04233 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CD74P04233 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.34□□□□□ -0.11
CD74P04233 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CD74P04233 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.34□□□□□ -0.11
CD74P04233 AC103564.2-201ENST00000432853 1299 ntBASIC14.34□□□□□ -0.11
CD74P04233 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.34□□□□□ -0.11
CD74P04233 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.34□□□□□ -0.11
CD74P04233 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CD74P04233 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.34□□□□□ -0.11
CD74P04233 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.34□□□□□ -0.11
CD74P04233 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.34□□□□□ -0.11
CD74P04233 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CD74P04233 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.34□□□□□ -0.11
CD74P04233 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.34□□□□□ -0.11
CD74P04233 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.34□□□□□ -0.11
CD74P04233 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.34□□□□□ -0.11
CD74P04233 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CD74P04233 AC010947.1-201ENST00000623454 693 ntBASIC14.34□□□□□ -0.11
CD74P04233 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.34□□□□□ -0.11
CD74P04233 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.34□□□□□ -0.11
CD74P04233 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.34□□□□□ -0.11
CD74P04233 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.34□□□□□ -0.11
CD74P04233 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CD74P04233 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CD74P04233 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.34□□□□□ -0.11
CD74P04233 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CD74P04233 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD74P04233 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.33□□□□□ -0.11
CD74P04233 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD74P04233 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD74P04233 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD74P04233 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.33□□□□□ -0.11
CD74P04233 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CD74P04233 KRT8P10-201ENST00000450021 1447 ntBASIC14.33□□□□□ -0.11
CD74P04233 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CD74P04233 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
CD74P04233 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD74P04233 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD74P04233 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD74P04233 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD74P04233 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.33□□□□□ -0.11
CD74P04233 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.33□□□□□ -0.12
CD74P04233 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD74P04233 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CD74P04233 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
CD74P04233 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CD74P04233 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms