Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SUPT3HO75486 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SUPT3HO75486 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SUPT3HO75486 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.96■□□□□ 0.3
SUPT3HO75486 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.3
SUPT3HO75486 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SUPT3HO75486 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.96■□□□□ 0.3
SUPT3HO75486 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SUPT3HO75486 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SUPT3HO75486 NSUN5P1-202ENST00000421140 1535 ntBASIC16.96■□□□□ 0.3
SUPT3HO75486 NSUN5P2-203ENST00000457352 1529 ntBASIC16.96■□□□□ 0.3
SUPT3HO75486 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SUPT3HO75486 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SUPT3HO75486 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SUPT3HO75486 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.95■□□□□ 0.3
SUPT3HO75486 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.95■□□□□ 0.3
SUPT3HO75486 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SUPT3HO75486 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SUPT3HO75486 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SUPT3HO75486 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SUPT3HO75486 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.95■□□□□ 0.3
SUPT3HO75486 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.95■□□□□ 0.3
SUPT3HO75486 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.95■□□□□ 0.3
SUPT3HO75486 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.95■□□□□ 0.3
SUPT3HO75486 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.95■□□□□ 0.3
SUPT3HO75486 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.95■□□□□ 0.3
SUPT3HO75486 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.95■□□□□ 0.3
SUPT3HO75486 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.95■□□□□ 0.3
SUPT3HO75486 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.95■□□□□ 0.3
SUPT3HO75486 AC092068.3-201ENST00000587894 2016 ntBASIC16.95■□□□□ 0.3
SUPT3HO75486 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUPT3HO75486 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.95■□□□□ 0.3
SUPT3HO75486 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SUPT3HO75486 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SUPT3HO75486 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUPT3HO75486 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.95■□□□□ 0.3
SUPT3HO75486 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.95■□□□□ 0.3
SUPT3HO75486 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUPT3HO75486 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUPT3HO75486 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUPT3HO75486 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUPT3HO75486 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUPT3HO75486 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SUPT3HO75486 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.95■□□□□ 0.3
SUPT3HO75486 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.95■□□□□ 0.3
SUPT3HO75486 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 AGGF1P2-201ENST00000426656 2106 ntBASIC16.94■□□□□ 0.3
SUPT3HO75486 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SUPT3HO75486 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.94■□□□□ 0.3
SUPT3HO75486 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.94■□□□□ 0.3
SUPT3HO75486 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.94■□□□□ 0.3
SUPT3HO75486 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SUPT3HO75486 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.94■□□□□ 0.3
SUPT3HO75486 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.94■□□□□ 0.3
SUPT3HO75486 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.94■□□□□ 0.3
SUPT3HO75486 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.94■□□□□ 0.3
SUPT3HO75486 AC074051.2-201ENST00000565115 352 ntBASIC16.94■□□□□ 0.3
SUPT3HO75486 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.94■□□□□ 0.3
SUPT3HO75486 BNIP3P18-201ENST00000593976 575 ntBASIC16.94■□□□□ 0.3
SUPT3HO75486 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.94■□□□□ 0.3
SUPT3HO75486 AD001527.2-201ENST00000622994 785 ntBASIC16.94■□□□□ 0.3
SUPT3HO75486 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.94■□□□□ 0.3
SUPT3HO75486 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.94■□□□□ 0.3
SUPT3HO75486 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SUPT3HO75486 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.94■□□□□ 0.3
SUPT3HO75486 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.94■□□□□ 0.3
SUPT3HO75486 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.94■□□□□ 0.3
SUPT3HO75486 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.94■□□□□ 0.3
SUPT3HO75486 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.94■□□□□ 0.3
SUPT3HO75486 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SUPT3HO75486 AC008741.2-201ENST00000612792 3115 ntBASIC16.94■□□□□ 0.3
SUPT3HO75486 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.94■□□□□ 0.3
SUPT3HO75486 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
SUPT3HO75486 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SUPT3HO75486 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.93■□□□□ 0.3
SUPT3HO75486 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SUPT3HO75486 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SUPT3HO75486 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SUPT3HO75486 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SUPT3HO75486 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SUPT3HO75486 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.93■□□□□ 0.3
SUPT3HO75486 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SUPT3HO75486 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SUPT3HO75486 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms