Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTNND1O60716 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CTNND1O60716 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CTNND1O60716 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTNND1O60716 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTNND1O60716 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CTNND1O60716 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.79■□□□□ 0.76
CTNND1O60716 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CTNND1O60716 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CTNND1O60716 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.79■□□□□ 0.76
CTNND1O60716 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.79■□□□□ 0.76
CTNND1O60716 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTNND1O60716 AC016396.2-201ENST00000562575 1417 ntBASIC19.79■□□□□ 0.76
CTNND1O60716 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTNND1O60716 MIR346-201ENST00000362234 95 ntBASIC19.79■□□□□ 0.76
CTNND1O60716 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTNND1O60716 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTNND1O60716 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.79■□□□□ 0.76
CTNND1O60716 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.79■□□□□ 0.76
CTNND1O60716 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.79■□□□□ 0.76
CTNND1O60716 AC190387.1-201ENST00000551683 408 ntBASIC19.79■□□□□ 0.76
CTNND1O60716 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.79■□□□□ 0.76
CTNND1O60716 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.79■□□□□ 0.76
CTNND1O60716 AP001350.2-201ENST00000625104 1094 ntBASIC19.79■□□□□ 0.76
CTNND1O60716 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTNND1O60716 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTNND1O60716 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTNND1O60716 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CTNND1O60716 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.79■□□□□ 0.76
CTNND1O60716 FO538757.1-201ENST00000623083 1397 ntBASIC19.79■□□□□ 0.76
CTNND1O60716 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTNND1O60716 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTNND1O60716 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTNND1O60716 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTNND1O60716 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.78■□□□□ 0.76
CTNND1O60716 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CTNND1O60716 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CTNND1O60716 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
CTNND1O60716 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CTNND1O60716 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.78■□□□□ 0.76
CTNND1O60716 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.78■□□□□ 0.76
CTNND1O60716 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
CTNND1O60716 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.78■□□□□ 0.76
CTNND1O60716 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
CTNND1O60716 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
CTNND1O60716 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.78■□□□□ 0.76
CTNND1O60716 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.78■□□□□ 0.76
CTNND1O60716 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.78■□□□□ 0.76
CTNND1O60716 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 ALG1L8P-201ENST00000533887 760 ntBASIC19.78■□□□□ 0.76
CTNND1O60716 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.78■□□□□ 0.76
CTNND1O60716 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CTNND1O60716 AP000842.3-202ENST00000569238 1080 ntBASIC19.78■□□□□ 0.76
CTNND1O60716 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CTNND1O60716 AC027307.2-201ENST00000591252 911 ntBASIC19.78■□□□□ 0.76
CTNND1O60716 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.78■□□□□ 0.76
CTNND1O60716 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.78■□□□□ 0.76
CTNND1O60716 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.78■□□□□ 0.76
CTNND1O60716 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.78■□□□□ 0.76
CTNND1O60716 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CTNND1O60716 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTNND1O60716 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTNND1O60716 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.77■□□□□ 0.76
CTNND1O60716 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.77■□□□□ 0.76
CTNND1O60716 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTNND1O60716 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.77■□□□□ 0.76
CTNND1O60716 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTNND1O60716 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTNND1O60716 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTNND1O60716 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTNND1O60716 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTNND1O60716 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTNND1O60716 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.77■□□□□ 0.76
CTNND1O60716 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.77■□□□□ 0.76
CTNND1O60716 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.77■□□□□ 0.76
CTNND1O60716 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTNND1O60716 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.77■□□□□ 0.76
CTNND1O60716 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.77■□□□□ 0.76
CTNND1O60716 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CTNND1O60716 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTNND1O60716 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTNND1O60716 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CTNND1O60716 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.77■□□□□ 0.75
CTNND1O60716 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms