Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SLC28A2O43868 AC009053.2-201ENST00000563701 2365 ntBASIC16.46■□□□□ 0.23
SLC28A2O43868 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC28A2O43868 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC28A2O43868 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
SLC28A2O43868 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC28A2O43868 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC28A2O43868 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC28A2O43868 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC28A2O43868 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC28A2O43868 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SLC28A2O43868 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.46■□□□□ 0.22
SLC28A2O43868 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
SLC28A2O43868 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
SLC28A2O43868 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SLC28A2O43868 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SLC28A2O43868 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC28A2O43868 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SLC28A2O43868 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SLC28A2O43868 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC28A2O43868 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC28A2O43868 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
SLC28A2O43868 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC28A2O43868 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SLC28A2O43868 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC28A2O43868 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SLC28A2O43868 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SLC28A2O43868 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A2O43868 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
SLC28A2O43868 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SLC28A2O43868 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 AD000864.1-201ENST00000624076 2295 ntBASIC16.44■□□□□ 0.22
SLC28A2O43868 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC28A2O43868 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC28A2O43868 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC28A2O43868 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
SLC28A2O43868 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SLC28A2O43868 AC005034.1-201ENST00000426657 489 ntBASIC16.44■□□□□ 0.22
SLC28A2O43868 ABCD1P5-201ENST00000445663 754 ntBASIC16.44■□□□□ 0.22
SLC28A2O43868 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.44■□□□□ 0.22
SLC28A2O43868 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC28A2O43868 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC28A2O43868 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC28A2O43868 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC28A2O43868 AL139288.1-201ENST00000623748 933 ntBASIC16.44■□□□□ 0.22
SLC28A2O43868 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 INTS4P1-201ENST00000438455 1935 ntBASIC16.44■□□□□ 0.22
SLC28A2O43868 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
SLC28A2O43868 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC28A2O43868 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A2O43868 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A2O43868 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A2O43868 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC28A2O43868 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC28A2O43868 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A2O43868 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A2O43868 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SLC28A2O43868 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC28A2O43868 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A2O43868 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A2O43868 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A2O43868 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC28A2O43868 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.43■□□□□ 0.22
SLC28A2O43868 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.43■□□□□ 0.22
SLC28A2O43868 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC28A2O43868 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms