Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC005363.2-201ENST00000618631 242 ntBASIC16.61■□□□□ 0.25
HDAC3O15379 AC124864.1-201ENST00000623408 392 ntBASIC16.61■□□□□ 0.25
HDAC3O15379 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HDAC3O15379 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.61■□□□□ 0.25
HDAC3O15379 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
HDAC3O15379 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HDAC3O15379 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.61■□□□□ 0.25
HDAC3O15379 AC073508.3-201ENST00000619697 1419 ntBASIC16.61■□□□□ 0.25
HDAC3O15379 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
HDAC3O15379 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 AC132872.4-202ENST00000622924 2756 ntBASIC16.6■□□□□ 0.25
HDAC3O15379 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HDAC3O15379 ME2P1-201ENST00000426028 1970 ntBASIC16.6■□□□□ 0.25
HDAC3O15379 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HDAC3O15379 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HDAC3O15379 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HDAC3O15379 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HDAC3O15379 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HDAC3O15379 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HDAC3O15379 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.6■□□□□ 0.25
HDAC3O15379 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.6■□□□□ 0.25
HDAC3O15379 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.6■□□□□ 0.25
HDAC3O15379 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.6■□□□□ 0.25
HDAC3O15379 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 KLF4P1-201ENST00000412782 1185 ntBASIC16.6■□□□□ 0.25
HDAC3O15379 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HDAC3O15379 AC011840.4-201ENST00000578471 627 ntBASIC16.6■□□□□ 0.25
HDAC3O15379 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.6■□□□□ 0.25
HDAC3O15379 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HDAC3O15379 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HDAC3O15379 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HDAC3O15379 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HDAC3O15379 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDAC3O15379 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.6■□□□□ 0.25
HDAC3O15379 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.6■□□□□ 0.25
HDAC3O15379 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HDAC3O15379 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.59■□□□□ 0.25
HDAC3O15379 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HDAC3O15379 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HDAC3O15379 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.59■□□□□ 0.25
HDAC3O15379 AL596275.1-201ENST00000423464 877 ntBASIC16.59■□□□□ 0.25
HDAC3O15379 HLA-J-202ENST00000469281 1241 ntBASIC16.59■□□□□ 0.25
HDAC3O15379 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.59■□□□□ 0.25
HDAC3O15379 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.59■□□□□ 0.25
HDAC3O15379 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HDAC3O15379 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.59■□□□□ 0.25
HDAC3O15379 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HDAC3O15379 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.59■□□□□ 0.25
HDAC3O15379 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.59■□□□□ 0.25
HDAC3O15379 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HDAC3O15379 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
HDAC3O15379 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDAC3O15379 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HDAC3O15379 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDAC3O15379 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.58■□□□□ 0.25
HDAC3O15379 AL365203.3-201ENST00000609742 2057 ntBASIC16.58■□□□□ 0.25
HDAC3O15379 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDAC3O15379 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms