Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AL645728.1-201ENST00000366221 2101 ntBASIC13.69□□□□□ -0.22
UPK2O00526 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK2O00526 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.69□□□□□ -0.22
UPK2O00526 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK2O00526 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
UPK2O00526 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.68□□□□□ -0.22
UPK2O00526 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.68□□□□□ -0.22
UPK2O00526 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
UPK2O00526 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
UPK2O00526 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.68□□□□□ -0.22
UPK2O00526 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 LINC00982-205ENST00000420957 435 ntBASIC13.68□□□□□ -0.22
UPK2O00526 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UPK2O00526 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.68□□□□□ -0.22
UPK2O00526 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 AC004817.3-201ENST00000602957 2129 ntBASIC13.68□□□□□ -0.22
UPK2O00526 AC099336.1-202ENST00000602961 463 ntBASIC13.68□□□□□ -0.22
UPK2O00526 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UPK2O00526 AC073592.4-201ENST00000623827 446 ntBASIC13.68□□□□□ -0.22
UPK2O00526 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.68□□□□□ -0.22
UPK2O00526 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.68□□□□□ -0.22
UPK2O00526 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.68□□□□□ -0.22
UPK2O00526 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.68□□□□□ -0.22
UPK2O00526 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UPK2O00526 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.68□□□□□ -0.22
UPK2O00526 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 AC079776.2-201ENST00000641154 1609 ntBASIC13.68□□□□□ -0.22
UPK2O00526 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK2O00526 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
UPK2O00526 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
UPK2O00526 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
UPK2O00526 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UPK2O00526 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
UPK2O00526 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
UPK2O00526 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 FER1L4-210ENST00000615531 5998 ntBASIC13.67□□□□□ -0.22
UPK2O00526 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UPK2O00526 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UPK2O00526 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.67□□□□□ -0.22
UPK2O00526 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.67□□□□□ -0.22
UPK2O00526 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.67□□□□□ -0.22
UPK2O00526 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.67□□□□□ -0.22
UPK2O00526 DUX4L17-201ENST00000557360 1267 ntBASIC13.67□□□□□ -0.22
UPK2O00526 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.67□□□□□ -0.22
UPK2O00526 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.67□□□□□ -0.22
UPK2O00526 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.67□□□□□ -0.22
UPK2O00526 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.67□□□□□ -0.22
UPK2O00526 AC069148.1-201ENST00000608741 768 ntBASIC13.67□□□□□ -0.22
UPK2O00526 NPAP1P7-201ENST00000613027 823 ntBASIC13.67□□□□□ -0.22
UPK2O00526 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UPK2O00526 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
UPK2O00526 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.67□□□□□ -0.22
UPK2O00526 HLA-A-202ENST00000376806 1854 ntBASIC13.67□□□□□ -0.22
UPK2O00526 AL391256.1-201ENST00000443260 1855 ntBASIC13.67□□□□□ -0.22
UPK2O00526 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.67□□□□□ -0.22
UPK2O00526 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
UPK2O00526 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK2O00526 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms