Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RPS15P9-201ENST00000494093 319 ntBASIC18.17■□□□□ 0.5
O00370 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.17■□□□□ 0.5
O00370 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
O00370 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
O00370 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.17■□□□□ 0.5
O00370 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.17■□□□□ 0.5
O00370 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
O00370 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
O00370 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
O00370 AC243591.1-201ENST00000452967 1364 ntBASIC18.17■□□□□ 0.5
O00370 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
O00370 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.16■□□□□ 0.5
O00370 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
O00370 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
O00370 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
O00370 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
O00370 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
O00370 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
O00370 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.16■□□□□ 0.5
O00370 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
O00370 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
O00370 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
O00370 PAWRP1-201ENST00000451083 565 ntBASIC18.16■□□□□ 0.5
O00370 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.16■□□□□ 0.5
O00370 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.16■□□□□ 0.5
O00370 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.16■□□□□ 0.5
O00370 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.16■□□□□ 0.5
O00370 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
O00370 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.16■□□□□ 0.5
O00370 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
O00370 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
O00370 MIR1199-201ENST00000621445 119 ntBASIC18.16■□□□□ 0.5
O00370 AC116407.3-201ENST00000623905 1129 ntBASIC18.16■□□□□ 0.5
O00370 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
O00370 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
O00370 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
O00370 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
O00370 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
O00370 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
O00370 UBALD1-205ENST00000590891 2641 ntBASIC18.16■□□□□ 0.5
O00370 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
O00370 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
O00370 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
O00370 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.15■□□□□ 0.5
O00370 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.15■□□□□ 0.5
O00370 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
O00370 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.15■□□□□ 0.5
O00370 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.15■□□□□ 0.5
O00370 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.15■□□□□ 0.5
O00370 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.15■□□□□ 0.5
O00370 AC092910.1-201ENST00000482027 1129 ntBASIC18.15■□□□□ 0.5
O00370 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.15■□□□□ 0.5
O00370 DUX4L17-201ENST00000557360 1267 ntBASIC18.15■□□□□ 0.5
O00370 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.15■□□□□ 0.5
O00370 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
O00370 AC117500.6-201ENST00000624871 588 ntBASIC18.15■□□□□ 0.5
O00370 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.15■□□□□ 0.5
O00370 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 FLJ38576-201ENST00000623820 2459 ntBASIC18.15■□□□□ 0.5
O00370 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
O00370 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
O00370 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.15■□□□□ 0.5
O00370 AC092068.3-201ENST00000587894 2016 ntBASIC18.15■□□□□ 0.5
O00370 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
O00370 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.15■□□□□ 0.5
O00370 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
O00370 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
O00370 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
O00370 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.14■□□□□ 0.49
O00370 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.14■□□□□ 0.49
O00370 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
O00370 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.14■□□□□ 0.49
O00370 AC093909.1-201ENST00000504731 1122 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms