Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NFKBIEO00221 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NFKBIEO00221 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKBIEO00221 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.27■□□□□ 0.84
NFKBIEO00221 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.27■□□□□ 0.84
NFKBIEO00221 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKBIEO00221 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKBIEO00221 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKBIEO00221 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKBIEO00221 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.27■□□□□ 0.84
NFKBIEO00221 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NFKBIEO00221 AC234783.1-201ENST00000441761 496 ntBASIC20.27■□□□□ 0.84
NFKBIEO00221 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.27■□□□□ 0.84
NFKBIEO00221 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NFKBIEO00221 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NFKBIEO00221 SRD5A3P1-201ENST00000603021 949 ntBASIC20.27■□□□□ 0.84
NFKBIEO00221 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NFKBIEO00221 AL109936.8-201ENST00000641772 604 ntBASIC20.27■□□□□ 0.84
NFKBIEO00221 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
NFKBIEO00221 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NFKBIEO00221 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.27■□□□□ 0.84
NFKBIEO00221 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NFKBIEO00221 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NFKBIEO00221 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.27■□□□□ 0.84
NFKBIEO00221 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NFKBIEO00221 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NFKBIEO00221 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NFKBIEO00221 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.26■□□□□ 0.83
NFKBIEO00221 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NFKBIEO00221 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.26■□□□□ 0.83
NFKBIEO00221 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.26■□□□□ 0.83
NFKBIEO00221 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.26■□□□□ 0.83
NFKBIEO00221 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.26■□□□□ 0.83
NFKBIEO00221 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.26■□□□□ 0.83
NFKBIEO00221 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.26■□□□□ 0.83
NFKBIEO00221 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.26■□□□□ 0.83
NFKBIEO00221 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.26■□□□□ 0.83
NFKBIEO00221 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.26■□□□□ 0.83
NFKBIEO00221 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
NFKBIEO00221 AC023310.3-201ENST00000557027 670 ntBASIC20.26■□□□□ 0.83
NFKBIEO00221 AC100756.1-201ENST00000562736 682 ntBASIC20.26■□□□□ 0.83
NFKBIEO00221 AC138749.3-201ENST00000567691 622 ntBASIC20.26■□□□□ 0.83
NFKBIEO00221 AC116165.1-201ENST00000611806 668 ntBASIC20.26■□□□□ 0.83
NFKBIEO00221 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
NFKBIEO00221 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.26■□□□□ 0.83
NFKBIEO00221 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NFKBIEO00221 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.26■□□□□ 0.83
NFKBIEO00221 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.26■□□□□ 0.83
NFKBIEO00221 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.26■□□□□ 0.83
NFKBIEO00221 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NFKBIEO00221 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NFKBIEO00221 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.25■□□□□ 0.83
NFKBIEO00221 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.25■□□□□ 0.83
NFKBIEO00221 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
NFKBIEO00221 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.25■□□□□ 0.83
NFKBIEO00221 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.25■□□□□ 0.83
NFKBIEO00221 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NFKBIEO00221 CROCCP4-201ENST00000457096 498 ntBASIC20.25■□□□□ 0.83
NFKBIEO00221 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 AC098859.1-201ENST00000502915 1238 ntBASIC20.25■□□□□ 0.83
NFKBIEO00221 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NFKBIEO00221 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 RNA5SP410-201ENST00000516285 106 ntBASIC20.25■□□□□ 0.83
NFKBIEO00221 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.25■□□□□ 0.83
NFKBIEO00221 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
NFKBIEO00221 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.25■□□□□ 0.83
NFKBIEO00221 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 GPR182-203ENST00000622922 591 ntBASIC20.25■□□□□ 0.83
NFKBIEO00221 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.25■□□□□ 0.83
NFKBIEO00221 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.25■□□□□ 0.83
NFKBIEO00221 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKBIEO00221 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NFKBIEO00221 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NFKBIEO00221 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms